KEGG   Prunus avium (sweet cherry): 110754121
Entry
110754121         CDS       T05161                                 
Name
(RefSeq) general transcription factor IIE subunit 1
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110754121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pavi03021]
    110754121
Transcription machinery [BR:pavi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     110754121
 Prokaryotic type
  Archaeal type
    TFE
     110754121
SSDB
Motif
Pfam: TFIIE_alpha Zn-ribbon_8 CpXC HVO_2753_ZBP ADK_lid Zn_Tnp_IS1595 Zn_ribbon_SprT TF_Zn_Ribbon zf-ribbon_3
Other DBs
NCBI-GeneID: 110754121
NCBI-ProteinID: XP_021810837
UniProt: A0A6P5S8L6
Position
Unknown
AA seq 478 aa
MSIEPFNKLVKLVGRAFYDDITKGDNQPKTGRSDNRGIAVVVLDALSRRQWVREEDLAKD
LKLHSKQLRRTLRFFEEEKLVTRDHRRETAKGAKMHNAAVAATIDGLPAKEGEEKVKMHT
HSYCCLDYAQISDVVRYRVQRMKKKLKDELEDKNTVQEYVCPNCGKRYNALDALQLVSME
DEYFHCESCNGELVAESDKLASQEVGDGDDNARRRRREKLKDLLQKMEAQLKPIYDQLNR
VKDLPAPEFGGLQAWEARASAAKRAENGESNGMDPSKSSHGLGYGGTPMPFLGDTKVEVD
FSGVEGKGKDIKSEADGASLKVLPPWMIKQGMNLTKEQRGEVKQEAKMDGSGSLAAPEYS
EDKKFNTENNEKNLQDEYLKAYYAALIKRQEEEEAKKALESSETRVSDGPSGMSPSRQVG
MKSKRDEDEGDDNVDWEEAPITGNEENYKVNDLNVEADATAEAEAEAEDEDDIDWEEG
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgagcatcgagcctttcaacaagttagtgaagcttgtggggagagctttctacgacgac
attaccaaaggagataatcagcccaagaccggccggagcgacaataggggaatcgccgtg
gtggtgctcgatgccctctctagacgacaatgggtcagagaagaggatttggcaaaggac
ttgaaactgcactcaaagcaacttcgtcgtactttgcgattttttgaggaggaaaaactg
gtcaccagagatcataggagagagacagctaaaggtgcaaagatgcataatgctgctgtt
gctgccacgattgatgggctacctgcaaaagaaggggaagagaaagttaagatgcacact
cactcttattgctgtctggactatgcgcagatatctgatgtggtgaggtacagagtgcag
cgtatgaagaaaaaactgaaagatgaattggaggacaagaacactgttcaggaatatgta
tgccctaactgtgggaaaagatacaacgctttagatgcattgcaactggtttctatggag
gatgagtacttccactgtgaaagttgtaatggggaacttgtggctgagagtgacaagcta
gcttctcaagaagtcggagatggagacgacaatgcgaggaggcgacgacgtgaaaaattg
aaagacttgcttcaaaagatggaggcacaactaaagcctatatatgatcaacttaataga
gttaaagacttacctgctcctgaatttggaggtctccaagcttgggaagcgcgagcaagt
gcagctaaacgtgcagagaatggtgaatctaatggcatggatccctccaaatcttctcat
gggttgggatatggtggaacaccaatgccctttcttggagatacaaaggttgaagttgac
ttttctggggttgaaggcaaggggaaggatatcaaatctgaagctgatggtgcaagcctg
aaagttttgccaccttggatgatcaagcaagggatgaaccttacaaaggaacaacgtgga
gaggtcaagcaggaggcaaagatggatggcagtggcagtttagcagctccagaatactca
gaggacaaaaagtttaatactgaaaacaatgagaagaatttacaggatgagtacttgaaa
gcttattacgctgctttaataaaaagacaagaagaagaagaagcaaagaaagcactggaa
tcctcagaaacacgcgtctctgatggtccttccggaatgtctcctagccgtcaggtcggc
atgaaatcaaagcgtgatgaggatgaaggagatgataatgtggactgggaagaggctcca
attacaggtaatgaagaaaattacaaggtcaatgacttgaatgtggaagctgatgctaca
gcagaggcagaggcagaggcagaggatgaggatgatatagactgggaggaaggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system