KEGG   Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4
Entry
PSEBR_a4          CDS       T01472                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pba  Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:pba00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pba03032]
    PSEBR_a4
   03400 DNA repair and recombination proteins [BR:pba03400]
    PSEBR_a4
Enzymes [BR:pba01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PSEBR_a4
DNA replication proteins [BR:pba03032]
 Prokaryotic type
  DNA Topoisomerases
   PSEBR_a4
DNA repair and recombination proteins [BR:pba03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PSEBR_a4
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim GyrB_hook HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AEA66119
UniProt: F2KAC0
Position
3970..6348
AA seq 792 aa
MLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITV
RDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEQLV
LTVRRSGKIWEQTYIHGVPQAPMAIVGDSESTGTQIHFKASSETFKNIHFSWDILAKRIR
ELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTPVNQVFHFNVQREDGIGV
EIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQEGLAKKHKVATTG
DDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKLVV
GKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELYLVEGDSAGGSA
KQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHN
IIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDDAM
EEYMTQSALEDASLHLNEDAPGISGEALERLVNDFRLVMKTLKRLSRLYPQELTEHFIYL
PAVSLEQLSDYAAMQDWLAQYEVRLRTVEKSGLVYKASLREDRERNVWLPEVELISHGLS
NYVTFNRDFFGSNDYKTVVSLGAQLSTLLDEGAYIQRGERKKAVTEFKEALEWLMAESTK
RHTIQRYKGLGEMNPDQLWETTMDPGSRRMLKVTIEDAIGADQIFNTLMGDAVEPRRDFI
ESNALAVSNLDF
NT seq 2379 nt   +upstreamnt  +downstreamnt
gtgctgaaaggcctggatgccgtacgcaaacgtcccggtatgtacattggtgacaccgac
gatggtagcggcctgcaccacatggtgttcgaggtggtcgacaactccatcgacgaagcc
ctcgccggccattgcgacgacatcagcatcatcatccacccggatgagtccatcaccgtt
cgcgacaacggccgtggcatcccggtagacgtgcataaagaggaaggcgtttccgccgcc
gaggtcatcatgaccgtcctccacgcaggcggtaagttcgacgacaactcctacaaggta
tccggcggtctgcacggcgtaggtgtatcggtagtgaacgcgctgtccgaacaactggtc
ctgaccgttcgccgcagcggcaagatctgggagcagacctacatccacggcgtgccccag
gcaccgatggcgatcgttggcgacagcgaaagcacaggcacccagatccacttcaaggct
tcgagcgaaaccttcaagaacatccacttcagctgggacatcctggccaagcggattcgt
gaactgtccttcctcaactccggtgtcggcatcgtcctcaaggacgagcgcagcggcaag
gaagagctgttcaagtacgaaggcggcctgcgtgcgttcgttgagtacctgaacaccaac
aagaccccggtcaaccaggtgttccatttcaacgtccagcgtgaagacggcatcggcgtg
gaaatcgccctgcagtggaacgacagcttcaacgagaacctgttgtgcttcaccaacaac
atcccgcagcgcgacggcggcacccacctggtgggcttccgttcggcgctgacccgcaac
ttgaacaactacatcgaacaggaaggcctggcgaagaagcataaagtcgccaccaccggt
gacgatgcccgtgaaggcctgaccgcgattatctcggtgaaggtgccggatccgaagttc
agctcccagaccaaggacaagctggtgtcttccgaagtgaagaccgcagttgaacaggag
atgggcaagtacttctccgacttcctgctggaaaacccgaacgaagccaagctggtggtc
ggcaagatgatcgacgccgcccgtgcccgtgaagcggcgcgcaaggcccgtgagatgacc
cgccgcaaaggcgcgctggacatcgccggcttgccgggcaaactggccgactgccaggaa
aaggaccctgccctgtccgagctgtatctggtggaaggtgactctgctggcggttccgcc
aagcagggtcgcaaccgccgcacccaggccatcctgccgctcaagggcaagatcctgaac
gtcgagaaggcgcgcttcgacaagatgatttcctcccaggaagtcggcaccttgatcacg
gcgttgggctgcggtattggccgcgaagagtacaacatcgacaagctgcgctatcacaac
atcatcatcatgaccgatgctgacgtcgacggttcgcacatccgtacgctgctgctgaca
ttcttcttccgtcagttgccggagttgatcgagcgcggctacatctacatcgcccagccg
ccgctgtacaaggtcaagaaaggcaagcaagagcaatacatcaaagacgacgacgccatg
gaagagtacatgacgcagtcggccctggaagacgcgagcctgcacctgaacgaagatgcc
ccaggcatttccggtgaagcccttgagcgcctggtgaatgacttccgcctggtgatgaag
accctcaagcgtctgtcgcgcctgtacccacaggaactgaccgagcacttcatctacctg
ccagccgtgagcctggagcaactgtccgattacgcagcgatgcaggattggctggcccag
tacgaagtgcgcttgcgcactgtcgagaaatccggcctggtctacaaagccagcctgcgt
gaagaccgtgaacgtaacgtctggctgccggaggtcgaactgatctcccacggcctgtcg
aactacgtcaccttcaaccgcgacttcttcggcagcaacgactacaagaccgtcgtatcc
ctcggcgcgcaactgagcacgctgctggacgaaggtgcgtacatccaacgtggtgaacgc
aagaaggccgtgaccgagttcaaggaagcccttgagtggctgatggccgaaagcaccaag
cgccacaccatccagcgatacaaaggtcttggcgagatgaacccggatcagctgtgggaa
accaccatggatccaggctcgcgccggatgctgaaagtcaccatcgaagacgccattggc
gcggaccagatcttcaacaccctgatgggtgatgcggtcgagcctcgtcgtgacttcatc
gagagcaatgcgttggcggtatccaacctggatttctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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