KEGG T01472: PSEBR

Pseudomonas brassicacearum: PSEBR_a4137

Entry

PSEBR_a4137 CDS T01472

Definition

succinate--CoA ligase

Orthology

K01903

succinyl-CoA synthetase beta subunit [EC:6.2.1.5]

Organism

pba Pseudomonas brassicacearum

Pathway

pba00020	Citrate cycle (TCA cycle)
pba00640	Propanoate metabolism
pba00660	C5-Branched dibasic acid metabolism
pba01100	Metabolic pathways
pba01110	Biosynthesis of secondary metabolites
pba01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pba00020]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:pba00640]
Metabolism; Carbohydrate metabolism; C5-Branched dibasic acid metabolism [PATH:pba00660]

SSDB

Motif

Pfam:

ATP-grasp_2 Ligase_CoA ATP-grasp_5 ATP-grasp_4 GARS_A ATP-grasp OKR_DC_1_N

Other DBs

NCBI-GI:

330811084

NCBI-GeneID:

10473287

UniProt:

F2KKG6

Position

complement(5051391..5052557)

AA seq 388 aa
MNLHEYQGKQLFAEYGLPVSTGYAVDTPEAAAEACDKIGGSEWVVKAQVHAGGRGKAGGV
KLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYLGAVVDRSSRR
IVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRELAFQLGLEGKQVTQFAKI
FVGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKTFHDPSQDDP
REAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE
AFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAELGAKV
LAESGLNIIAATSLTDAAQQVVKAAEGK

NT seq 1167 nt +upstreamnt +downstreamnt
atgaatcttcacgagtatcagggtaagcagctgttcgctgagtacggcctgccagtatcc
accggttacgcggtagacaccccggaagcggcagcagaagcttgcgacaaaatcggcggc
agcgaatgggttgtcaaagcccaggttcacgccggtggtcgcggtaaagcgggcggcgtc
aagctggttcgcagcaaagaagacgccaaagccttcgcacagcagtggctgggcaagcgt
ctggtgacttaccagactgacgccaacggtcagccagtcaccaagatcctggttgaatcg
tgcactgatatcgctaaagagctgtacctgggcgctgtcgttgaccgttcgagccgccgc
atcgtgttcatggcttccaccgaaggtggcgtggacatcgagaaaatcgctcacgatacc
cctgagaaaatcctcaaggccaccatcgatccactggttggcgcacagccattccagggt
cgcgagctggcattccagctgggcctggaaggcaagcaggtcactcaattcgccaagatc
ttcgtaggtctggccaagctgttccaggaccacgacctggcactgctggaagtgaacccg
ctggtgatcaaggccgacggcgacctgcactgcctcgatgccaagatcaacatcgatgcc
aacgccatgtaccgtcagcctaagctgaagactttccacgatccgtcgcaagacgatccg
cgcgaagcgcacgctgccaagttcgaactgaactacgtggccctggaaggtaacatcggc
tgcatggtcaacggtgccggcctggccatgggtaccatggacatcgtcaacctgcatggc
ggcaagccagccaacttcctcgacgtgggcggtggtgctaccaaggaacgcgtaaccgaa
gcgttcaagatcatcctgtccgacaccaacgtcgctgcagtactggtcaacatcttcggc
ggcatcgttcgctgcgacatgattgccgaaggcatcatcggcgccgtgaaagaagttggc
gtgaaaatcccggttgttgttcgccttgaaggcaacaacgctgagctgggcgctaaagta
ctggcagaaagcggtttgaacatcatcgctgctaccagcctgaccgacgctgctcaacaa
gttgtcaaagctgcggagggcaaataa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (31)   

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