KEGG   Pseudomonas brassicacearum: PSEBR_a5350Help
Entry
PSEBR_a5350       CDS       T01472                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pba  Pseudomonas brassicacearum
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pba00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PSEBR_a5350
Enzymes [BR:pba01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PSEBR_a5350
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PSEBR_a5350
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(6470639..6471451)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVQVERRAKYL
LINAEVGTLISHLGMSGNLRLVEVGMPAAKHEHVDIELESGLALRYTDPRRFGAMLWSLD
PFNHELLIRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRRAAGGISRARYLKLAIEIKRILAHAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GGELCKVCGTGLREIRLGQRASVWCPRCQS
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgccagaactgccggaagtcgaaaccacccgtcgcggaatcgcgccccatcttgaaggc
cagcgggtcagccgcgtggtggtccgcgaccgccgcctgcgctggccgatcccggaagat
ctcgacgtgcggctttcgggccagcgcatcgtgcaggtggagcggcgggccaagtacctg
ttgatcaatgccgaggtcggcacgttgatcagccacctgggcatgtccggcaatctgcgc
ttggtggaggtcggcatgccggccgccaagcacgagcacgtggacatcgagctggaatcc
ggcctggccttgcgctacaccgaccctcggcgctttggcgcgatgctctggagccttgac
ccgttcaatcacgagctgttgattcgcctgggtcccgagccgttgaccgacctgttcgat
ggcgaacggttgttccagctttcgcgagggcgttccatggcggtcaagccgttcatcatg
gacaacgcggtggtggtgggggtgggcaatatctacgcgaccgaggccctgttcgccgcc
gggatcgacccacgccgggccgccggaggcatttcccgggcgcgttacctgaagctggcg
atcgagatcaagcgcatcctcgcccatgccatcgagcgcggtggcaccacgctgcgggac
tttatcggcggggacggccaacctggctatttccagcaggaactgttcgtctacggacgg
ggcggggagctgtgcaaagtctgtggcacggggctgcgggaaatccgcctgggccagcgt
gcgagcgtctggtgtccacgctgtcagagctga

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