KEGG   Pogonomyrmex barbatus (red harvester ant): 105424171
Entry
105424171         CDS       T04903                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX47
  KO
K14777  ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pbar03009]
    105424171
Enzymes [BR:pbar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     105424171
Ribosome biogenesis [BR:pbar03009]
 Eukaryotic type
  90S particles
   Helicases
    105424171
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_19
Other DBs
NCBI-GeneID: 105424171
NCBI-ProteinID: XP_011632565
UniProt: A0A6I9W2E0
Position
Unknown
AA seq 451 aa
MENSENTVKDINDDDNIEKVMWKDLGLVDILCKACLDLKWKEPTKIQREAIPLTLQGKDV
IGLAETGSGKTAAFALPILQALLENPQRYFALVLTPTRELAFQISEQFDAIGSGMGVKTV
VLVGGMDMHAQGLILEKKPHIIIATPGRLVDHLENTKGFNLRQLKFLVMDEADRILNMDF
EVEVDKILRVIPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIF
IPVKFKDVYLVHILNELAGNSFMIFCGTCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIA
ALTKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRAI
TFVTQYDVELYQRIEQLISKQLPLYSTEENEVMLLQERVSEAQRXXXXDMKNIEENKKSS
KRKRGGGDNEDDDTEQSIGVRKRMKVKSKRK
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggagaattcagaaaacacagtcaaagatatcaatgatgatgataatatcgaaaaagtc
atgtggaaagatctgggacttgtggatatactctgcaaagcatgcttagatttaaaatgg
aaagaacctaccaagattcaacgggaagctatccctttaacacttcaagggaaggatgtg
attggattagcagagactggatctggaaaaactgcagcttttgctttacccatactacaa
gcattgttagagaatccacaaagatattttgcgttagtgttaacacctacaagggaattg
gcattccaaatctcagaacaatttgatgcgataggttctggtatgggtgtgaagactgta
gtactagtaggtggaatggacatgcatgcacaaggactgatattagaaaaaaaacctcat
atcatcattgctacacctggtagattagtcgatcacttggaaaacacgaaaggcttcaat
ctacgacaattaaagtttctggtcatggatgaggcagatcgcattttgaatatggatttt
gaagtggaagttgataaaattctcagagtaataccacgagaaaggaggacgttattattt
tcagcgactatgactaagaaggtgcagaagttacaacgtgcatctttacgaaatcctgta
aaggttgaagtatctacaaagtatcaaactgtagaaaaattgcaacagtattatatattt
attccagtgaaattcaaggatgtgtatttagtacacattttgaatgaactggcgggcaat
agttttatgatattttgcgggacctgcaacaacaccgtgagaactgctctattgttgcga
aacttaggattcacggcagttcctttgcatggacaaatgtcacaaaacaagaggatcgcc
gcgcttacaaaatttaaggcgaaaaatagatctatattaatttcaacagacgttgctagc
agaggtctcgacattccacatgtagatattgtcatcaattttgatatccctacgcacagt
aaggattatatacacagagtaggtcgaactgcacgtgcaggtcgatcaggccgtgctatt
acgtttgttacacaatatgacgtagagctgtatcaacgaatagaacaattgatatcgaag
cagctgccgttatattctacagaagagaatgaagtaatgttgctgcaagagagagtgagc
gaagcgcagcgannnnnnnnnnaggatatgaaaaatatcgaagaaaacaagaagtcgagt
aaacggaaacgaggaggtggagacaatgaggacgacgatacagaacaatctattggagtg
agaaaaagaatgaaagtaaaaagcaaaagaaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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