KEGG   Pogonomyrmex barbatus (red harvester ant): 105433512
Entry
105433512         CDS       T04903                                 
Name
(RefSeq) collagen alpha-6(IV) chain
  KO
K06237  collagen type IV alpha
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105433512
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pbar04147]
    105433512
   00536 Glycosaminoglycan binding proteins [BR:pbar00536]
    105433512
Exosome [BR:pbar04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   105433512
Glycosaminoglycan binding proteins [BR:pbar00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   105433512
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 105433512
NCBI-ProteinID: XP_011647172
UniProt: A0A6I9WWT4
Position
Unknown
AA seq 1839 aa
MRPRAAATSRIIGDASRGISRPVPLVLRITCVLALLVLVATWIPIAEAVICRDSYKCNCT
GIKGQPGYPGIPGPQGPEGLPGDTGPDGPFGPKGEKGAGGEPGATGEKGYRGDDGIQGFG
GAPGLSGNPGLLGVMGPDGLDGCNGTDGRTGAPGLPGTFGPRGVMGPSGDYGLPGEPGEG
GINSEGSKGIRGNPGIDGPEGYPGQPGLTGEMGHPGDTGDFGLPGAPGLPGMQGERGDTV
YGVKGPRGEQGDRGEPGPPATDEHRKNENSTPVKGFPGPKGMRGFRGDRGRKGEMGAKGP
QGRPGYVGIKGMKGEQGEDGPRGKQGAEGPPGPAGEKGEKGAPGFAGMPGPDGQDGELGE
EGNRGPPGRQGAEGEPGLYIPELDEIIAGNIGIQGDLGPPGEPGQTGTPGLPGKVGFIGP
PGPPGPPGIPGLAGAKGSSIKGEQGDDGLSGTMGPQGPPGLPGLPGIMGAKGFPGVTIIG
PPGLDGNPGLPGLSGPPGDRGDPGPPGEKGFPGKGIRIRGPTGERGLPGTPGIPGPDGWP
GSPGFKGIKGFRGDDCGICAPGLPGEKGERGEPGLDGYPGASGFPGLPGPRGYKGIQGKR
GPQGPAGLEGDSGRPGIAGVQGPKGQPGRIFFPQNKTKGSPPGDFGEKGLPGPEGLRGPR
GRPGPIGSPGIPGPKGDKGDHGLPGLPGRDGLPGWDGIPGEKGENASISRLEFLRGDSGY
PGVKGIKGIQGESGKKGEPGNTAEYYVKATGDKGYKGIRGAPGEPGFKGFQGHPGDEGLP
GLPGERGSPGISLQGPIGLKGYPGMPGDQGFRGTPGSPGSQGPVGFPGRIGNKGERGDPG
TNLTYGEIGERGWYGPKGDTGDFGPQGLPGRPGQDGPKGIKGAKGAPGFEGLPGLQGAKG
QRGDSIQGDRGFPGISGQPGMPGRIGDVGLRGPDGPSGFDGMKGLKGEIGFIGRRGDDGD
VGPQGYEGLHGMQGQPGAPGEKGDVGDVGEPGPLGWSGFDGIDGAPGVKGERGDIGVPGL
PGVRGPPGLKGIIGDIGLEGLSGIRGENSFSGPQGDQGEPGFMGEPGPPGLAGFDGRPGL
PGEPGFGPDGFNGLPGEKGEPGFDGYDGIIGPKGEIGDMGPDGVKGERGEPGFPGRPGGP
GIPGRHGTKGERGPIGPPGFDGLKGKPGVDGDPGIMGRPGMPGEPGVRGIPGIMGAPGSK
GYVGEPGLPSYAFASKGDYGNRGHDGFVGAKGQIGEPGYHGIPGRKGQIGDRGYPGPTGF
PGLPGFPGLPGDEGPRGAPGLPGEFAEPGEPGRAGLDGMPGIPGRAGQKGAPGEYGPDGP
KGISGDIGHSLRGPKGMIGEPGPRGFVGIPGMPGLEGLQGFPGAPGLKGFRGDQGLPAES
TRGQSGDSGWPGLDGLVGPKGMKGDSGLPGFDGLPGLKGEPGETGEPGLRGLPGPEGPQG
PKGEPGINPFPPFPRRGLPGDVGMVGLPGFAGPQGIMGEPGKDGLPGRQGERGMIGFTGP
QGSDGKDGPPGYQGPPGATGRQGQPGFPGPPGLPAPNGIGPRDRGFYFARHSQSEMIPIC
PRNTVKIWEGFSLLHTMGNGRAYAQDLGAAGSCIKKFSTMPFLFCNLNNVCDYANRNDYS
YWLSTTEPMPMMMTPIPAPEVGRYISRCSVCETPTRVIAIHSQSMTIPECPGGWEEIWIG
YSFLMHRDAGADGGGQSLVSPGSCLEEFRVRPFIECRGLGTCNYFATATSYWLATIRDDE
MFRRPLQQTLKADHTSRVSRCAVCLRRRTTEILKPFTSNNERTPNNWGIAPPASPPRYDP
SRTQASRGRYSSQRRIPYHYRRRGHIRGKQRSTESPNNL
NT seq 5520 nt   +upstreamnt  +downstreamnt
atgcggcccagggccgcggcgacgtcaagaatcatcggcgacgcgagccgcggcatctcg
cggccggtcccgctcgtcctgcgaatcacctgcgtccttgccctactggtgcttgtcgcc
acgtggataccaatcgccgaggctgtgatttgcagagactcgtacaaatgcaattgtacc
ggaataaaagggcagccaggatatcctgggatacctgggccacaaggaccagaaggactc
ccaggtgacactggacccgatggcccctttggacccaaaggcgagaaaggagcaggagga
gagcctggagctaccggagaaaagggctaccgaggcgacgatggtatacaaggatttggg
ggagccccgggactttccggtaatcctggtttacttggtgtgatgggtccagacggattg
gacggatgcaacggaactgacggtcgtaccggtgcaccgggactgcccggaactttcggg
ccccgtggggtaatgggaccctctggcgattatggtttgccgggagaacctggtgaggga
ggtatcaattcagaaggctccaaaggaattcgcgggaatcccggtatcgatggaccggag
ggttatccaggacagccgggtctcaccggcgagatgggccatccaggagacacgggcgac
tttggtctaccaggtgctccaggcttgccaggcatgcaaggtgaacgcggtgacactgtc
tatggtgtaaaaggtccacgtggcgaacagggagacagaggagagcctggaccaccggct
acggacgaacacaggaagaatgaaaattcgacgcccgtaaagggttttccgggaccaaaa
ggcatgagaggcttccgaggcgaccgaggtcgcaaaggagagatgggcgccaaaggacca
cagggtcgaccaggttatgtaggtatcaaaggtatgaaaggagaacaaggtgaagatgga
ccaagaggtaagcagggagccgagggcccaccaggtccagctggtgaaaagggagaaaag
ggagctccaggattcgctggaatgcctggtccggacggacaagatggagaacttggagag
gaaggaaatcgtggcccacccggcagacaaggggctgaaggagaacctggactgtatatc
ccagaacttgatgaaataatcgccggaaatattggaattcaaggagatcttggacctcct
ggtgaacctggtcaaacaggaacaccgggtctgccaggaaaggtcggctttataggaccg
ccaggaccaccaggacctccaggtatccctggtttagcgggagcaaaaggttcatccata
aaaggagagcaaggagacgatggcttatcaggcactatgggacctcaaggacctcccgga
ttgcctggcttacccggaattatgggagccaaaggatttccgggagtaacgataattgga
ccaccgggactggatggcaatccaggccttccaggattgtcaggtccacccggtgatcgt
ggtgaccctggtcctccaggagagaaaggttttcctgggaaaggtataagaattcgtgga
ccaactggagaacgcggtctaccgggaacaccaggtattcctggtcccgatggttggcct
ggttctcctggctttaaaggtatcaaaggttttcgaggagacgattgcggcatatgtgct
ccaggtctacccggtgagaaaggagaacgtggtgaacctggcttggatggatatcccgga
gcttccggtttccctggactacctggtccacgaggatacaaaggaatacaagggaaacga
ggcccacaaggaccggcgggacttgaaggtgacagtggaagacccggtattgcgggagtt
cagggacctaaaggacaaccgggaaggatattcttccctcaaaataaaacgaaggggagt
ccgccaggcgacttcggcgagaagggcttacctggtcccgaaggtcttagaggtccacgg
ggacgtccggggcccattggaagcccgggtataccaggaccgaaaggagacaaaggtgat
catggtcttcctgggttaccgggaagagatggtttgccaggatgggacggcattcctggt
gaaaaaggtgaaaatgcgtcgatatcaagacttgaatttttgcgtggagattcaggatat
ccgggagtgaagggaatcaaaggaatacaaggagagagcggtaaaaagggagaacctggt
aataccgcggagtattatgtaaaagctacgggtgataaaggctacaaaggaatcagagga
gctcctggcgaacctggctttaaaggtttccaaggacatcctggcgacgaaggtctacca
ggattgcctggtgaacgaggttctccaggaatttcacttcaaggtcctattggcttaaaa
ggataccctggaatgccgggagatcaaggttttcggggtacaccaggttcacctggatca
cagggaccagtgggtttcccgggtcgcattggtaacaaaggtgaacgaggagatccgggt
acaaatttaacatacggtgaaattggagaacgcggatggtatggtccaaaaggtgacacc
ggcgattttggtccacaaggattgcctggtcgaccaggacaggatggtccaaagggtatc
aaaggcgctaagggagcgcctggtttcgaaggattacctggacttcaaggagccaaaggt
caacgtggagatagtattcaaggtgatcgtggatttccaggaatatctggccagcctgga
atgcccggaagaatcggagatgtcggtctccgtggtcctgatggtccttctggtttcgat
gggatgaaaggcttgaaaggggaaattggctttattggacgacgtggtgacgatggtgat
gtgggccctcaagggtacgaagggttacacggaatgcaaggtcaaccaggtgctccagga
gagaagggagatgttggcgatgtcggcgagccaggaccacttggttggtccggtttcgat
ggtatagacggagcacctggtgttaaaggagaaagaggagacattggagttcctggttta
ccaggagtgaggggaccacctggactcaagggtatcatcggtgatattggtctcgaagga
ttatcaggaatccgtggtgaaaattccttcagtggtcctcaaggtgatcaaggtgaacct
ggttttatgggggaacctggaccgcccggtctagctggattcgatggacgaccaggatta
ccgggagaaccaggattcggccctgatggtttcaatggtttaccaggagaaaaaggcgaa
cctggatttgatggctatgatggtatcataggaccaaagggagaaattggtgatatgggt
cctgatggagtaaaaggtgaacgaggcgagccaggtttcccaggaagaccaggtggacct
ggaatacccggtagacatggtacaaaaggtgaaagaggcccaattgggccacctgggttt
gatggtttgaaaggaaaaccaggtgtcgatggtgatccaggtataatgggcagaccagga
atgccgggtgagccgggtgtgaggggaatcccaggtattatgggtgcccctggatcaaaa
ggttacgtaggtgaacctggtttaccatcttacgcatttgcgagtaaaggtgattacggt
aatcgtggccatgatggtttcgttggtgcgaaagggcagataggtgaaccaggatatcat
ggcatacccggccgtaagggtcaaattggagatagaggctatccaggtcctaccggtttc
ccaggattacccggtttccctggtttaccgggtgatgaaggacctcgtggagctccagga
ttgcctggtgaattcgctgaacccggtgaaccgggtcgcgctggtctcgatggtatgcct
ggtattccaggacgtgcaggacaaaaaggagctcctggtgaatatggcccagatggacct
aaaggaatttctggtgatataggtcatagtcttcgcggtcctaaaggaatgatcggagaa
ccaggtccccgaggatttgtcggtataccgggtatgccaggattagaaggattgcaaggt
tttcctggggcaccaggactgaaaggtttccgtggagatcagggattacctgctgaaagc
actagaggacaatctggcgattctggatggcctggattggatggtctagtcggaccgaag
ggaatgaaaggtgattctggtttacctggttttgatggattaccaggtctgaaaggagaa
ccgggagaaactggtgaacctggtctacgtggattgcctggtcctgaaggaccacaggga
ccaaaaggagaacccggcataaatcctttcccaccgttcccaagacgaggtcttcctggt
gatgtaggaatggtcggattaccaggttttgctggaccacagggaataatgggtgagcct
ggtaaggatggcctaccgggacgacagggtgaaagaggaatgattggatttactggacca
caaggatcagatggtaaagatgggcctcccggatatcaaggacctcccggagcaaccggc
cgacaaggacaaccaggtttccccggcccacctggattacctgcgccaaatggaattggt
ccaagagaccgaggattctactttgctcgtcattcacagtccgagatgataccaatttgt
ccaaggaatactgtaaagatctgggaaggattttctctattgcatacgatgggtaatgga
cgagcttatgcgcaggatcttggcgctgctggcagttgcatcaagaagttctccactatg
cccttcctattctgtaacctgaacaatgtatgcgattacgccaatcgtaacgattacagt
tattggcttagtacaaccgaacctatgccgatgatgatgacaccaataccagctccggaa
gttggtagatacatatcgagatgctctgtatgcgagacgccgaccagggttatagctatt
cacagtcaatctatgacgatacctgaatgtccgggtggttgggaggaaatttggattggc
tacagtttcctcatgcacagagatgcaggtgcagatggcggcggccagtccttagtttca
cctggatcctgcttggaggaattccgcgtcaggccatttatcgaatgtcgcggtcttggc
acgtgcaattactttgccacagccacgtcgtattggctggcaactattcgcgacgacgag
atgttccgcagaccgctgcagcagactcttaaagctgatcacacgtcccgtgtgagccgt
tgtgccgtatgtcttcgccgaaggaccactgaaattctgaaacccttcacatcgaacaat
gagcgaactcctaataattggggtattgctccaccggcatcaccacctcgctatgatcct
tctaggacacaagctagccgaggaagatattccagccagagacgtataccctatcattat
cgcaggagaggtcatattcgtggaaagcagcgatcgacagagtctcccaacaatctgtag

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