KEGG   Thiopseudomonas alkaliphila: AKN87_09050
Entry
AKN87_09050       CDS       T04152                                 
Name
(GenBank) recombinase RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
pbb  Thiopseudomonas alkaliphila
Pathway
pbb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AKN87_09050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbb03400]
    AKN87_09050
DNA repair and recombination proteins [BR:pbb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AKN87_09050
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_21 AAA_13 DUF2813 AAA_29 ABC_tran AAA_16 NB-ARC CFAP141 AAA_27 DUF2326 RsgA_GTPase ATPase_2
Other DBs
NCBI-ProteinID: AKX45215
UniProt: A0A0K1XEA4
Position
1873859..1874953
AA seq 364 aa
MGIRQLQINGVRNLHPVTLNLSPQINVFYGENGSGKTSVLEAIHLLALTRSFRSNRIQPV
IQQQQEQCLVFAELHDVSLDTVHRLGMSRNRQAELQLRLDGQAIKSAAELAAVLPVQVIN
PDSFSLLEGAPKVRRQFLDWGVFHVEHSFMPAWQRLQHSLRQRNSLLRHATIDPISQQSW
DRELSLASAQIDQLRQAYIQQLKPVFEEVLGKLITLEGLSLSYYRGWDRERELSEVLLSN
YERDRQLGYTQAGPQRADLRIRIGTTNSVDVLSRGQQKLVVCALRIAQGYLLSRLRQHNC
IYLVDDLPSELDQQHRKALCQLLENLNCQVFITSIDKDLMIHDWSEATSVKMFHVEHGQI
TPSE
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgggcattcgccaattacagattaacggggtgcgcaatctacaccccgtaactcttaat
ctttccccgcaaattaatgtcttttatggcgagaatggcagtggtaaaaccagtgtctta
gaagccattcatttgttagcactcacgcgctctttccgtagtaatcgaattcagccggtg
attcagcagcagcaagagcaatgtctagtatttgctgagttacacgatgtaagtttagat
acagtccatcgactaggtatgagtcgtaatcgtcaggctgagttacagttacgtttagat
gggcaggcaataaaaagcgctgctgaattagctgcagtgttgccggtgcaggtgattaat
cccgatagttttagtttgttagaaggggcgcctaaggtccgtcggcagtttttagattgg
ggagtgttccacgtggaacattcttttatgcccgcttggcaaaggctacagcattcgctg
cggcaaagaaattcattgctgcgtcatgctacaatagaccccatttctcagcagagctgg
gaccgtgagctaagcttagcaagcgcgcagattgatcagttacgccaagcctatattcag
cagttaaaacctgtgtttgaagaagtactgggcaaacttattacccttgaagggctcagc
ctaagttattaccgcggctgggatcgagagcgcgaactaagcgaagtgttactaagtaat
tatgagcgtgatcggcagctgggatatacccaagccggaccacagcgggcagatttacgg
ataagaattggcaccactaactcggttgatgtgttgtcccgaggccagcagaagctggta
gtctgtgccctaagaattgcccagggttatctgttatcacgtttgcgtcaacacaactgt
atttaccttgtggatgatctgccatcagagcttgatcagcagcatcgtaaggcgttatgt
cagttgttagaaaatttaaattgtcaggtttttatcaccagtattgataaagacctaatg
atccatgattggagtgaagccacttcggtcaaaatgttccacgtggaacatggacaaatc
acaccttcggagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (78)   
   KEGG ORTHOLOGY (1)   
   RefGene (75)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (98)   

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