KEGG   Pseudomonas brassicacearum DF41: CD58_13335
Entry
CD58_13335        CDS       T03174                                 
Name
(GenBank) glycogen debranching protein
  KO
K01214  isoamylase [EC:3.2.1.68]
Organism
pbc  Pseudomonas brassicacearum DF41
Pathway
pbc00500  Starch and sucrose metabolism
pbc01100  Metabolic pathways
pbc01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    CD58_13335
Enzymes [BR:pbc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.68  isoamylase
     CD58_13335
SSDB
Motif
Pfam: CBM_48 Alpha-amylase Isoamylase_C Glyco_hydro_31_2nd GHL5
Other DBs
NCBI-ProteinID: AHL33819
UniProt: W8PIN2
Position
complement(2934064..2936223)
AA seq 719 aa
MTRPKKTTPPPVIEASRIREGLPFPLGATWDGLGVNFALFSANATKVELCIFDDAGEVEL
ERIELPEYTDEIYHGYLPDAHPGLIYGYRVYGAYDPENGHRFNPNKLLIDPYAKQLVGQL
KWSEALFGYTIGHPDGDLSFDERDSAPFVPKCKVIDPAHTWGNDQRVSVPWDKTILYETH
VRGISMRHPSVPENLRGTFAGLMVDDVLEHIRKLGVSSVELLPVHAFVNDQHLLHKGMTN
YWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHEANLEVILDVVYNHTAEGNEQGPTLSM
RGIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQMVTDSLRYWATEMHVDGFRFDL
ATILGRYHDGFDERHSFLVACRQDPVLRQVKMIAEPWDCGPGGYQVGGFPPGWVEWNDKF
RDTVRAFWKGDDGQLADFASRMTASGEMFNQRGRRPYASVNFVTAHDGFTLNDLVSYNDK
HNEANDENNQDGSNNNLSWNHGVEGPTDDPQINELRHRQMRNFFATLLLAQGTPMLVAGD
EFARTQHGNNNAYCQDSEIGWVNWDLSEEGAALLKFVKRLIKLRLAYPILRRGRFLVGNY
NEDIGVKDVTWLAPDGSEMTTEQWQDGHGRCLGMLMDGRAQETGIRRKGADATLLLVVNA
HHDIVNFLLPEVPEGSFWTCMVDTNQPSVRGQERFDFNSEYSVTGRSLLLFELQREEED
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgacccgtccaaaaaaaaccacgccgccgccggttatcgaggcttcgcggatccgtgaa
gggctgccttttccactcggtgctacctgggatggcctcggggtcaatttcgcgctgttc
tccgccaacgccaccaaggttgagctgtgtattttcgatgatgcaggcgaggtcgaactc
gaacgtatcgagctgccggagtacaccgacgagatttaccacggctatctgcccgacgcc
catccagggctgatctatggctaccgggtctatggcgcctacgatccggagaacggccat
cgtttcaaccccaacaagttgctgatcgacccttacgccaaacaattggtcggccaattg
aagtggtccgaagcgctgttcggctacaccatcggccaccccgacggcgacctcagcttc
gatgagcgtgacagcgcgccgttcgtgcccaaatgcaaagtcatcgacccggcccacacc
tggggcaatgaccagcgtgtcagcgtgccctgggacaagacgatcctgtatgaaacccat
gtgcgcggcatcagcatgcggcatccgtcggtgccggaaaatctgcgagggaccttcgcc
gggttgatggtcgatgacgtgctggagcacatccgcaagttgggtgtttcatcggttgag
ctgctgcccgtccatgccttcgtcaatgaccagcatctgttgcacaaaggcatgaccaac
tactggggctacaacagcattgccttcttcgcccccgacccgcgttacctggccagcggc
aagatcgccgagttcaaggaaatggtcgcccacctgcacgaggctaacctggaggttatc
ctcgatgtggtctacaaccacacggccgaaggcaatgaacaaggcccgaccctgtccatg
cgcggcatcgacaatgcgtcgtactaccggctgatgcccgacgacaagcgctattacatc
aacgactccggcaccggcaacaccctggacctgagccacccgtgcgtcttgcagatggtc
accgactccctgcgctattgggccacggagatgcatgtcgacggtttccgctttgacctg
gcgacgattctgggccgctaccatgacggcttcgacgagcgtcacagcttcctcgtcgcc
tgccgccaggacccggtgctgcgccaggtgaagatgattgccgagccttgggactgcggc
cctggtggctatcaagtggggggctttccaccgggctgggtggagtggaacgacaagttc
cgcgacacggtgcgcgcgttctggaaaggcgacgacggccagctggccgatttcgccagc
cgcatgaccgcctcgggcgagatgttcaaccagcggggccgccgcccttacgcctcggtg
aatttcgtgaccgcccatgacgggtttaccctcaatgacctggtctcgtacaacgacaag
cacaacgaagccaacgacgaaaacaaccaggacggtagcaataacaacctgtcctggaac
cacggtgtcgagggcccgacggacgatccgcagatcaacgaattgcgccaccggcagatg
cgtaacttcttcgcgaccttgctgctggcccaaggcacaccgatgctcgtcgccggggac
gagttcgcccgtacccaacatggcaacaacaatgcctattgccaggacagcgaaatcggt
tgggtcaactgggacctgagcgaggaaggcgcggcgctgctcaagttcgtcaagcgcctg
atcaagttgcgcctggcctacccgatcctgcgccgtggacggttcctggtgggcaattac
aacgaggacatcggcgtcaaggacgtgacctggctggcgccggacggcagcgagatgacc
accgaacaatggcaggacggccacggccggtgcctgggcatgttgatggacggtcgagcc
caggaaaccggcatccgtcgcaagggcgctgacgcgacgttgctgctggtggtcaacgct
caccacgacatcgtcaacttcctcttgccagaagtccccgagggcagtttctggacctgc
atggtcgacactaaccagccgtcggtccgtggccaggagcggttcgatttcaattccgaa
tactctgtcaccggacgctccctgctgctgttcgaactgcaacgggaggaggaggattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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