KEGG   Pseudomonas brassicacearum DF41: CD58_23670
Entry
CD58_23670        CDS       T03174                                 
Symbol
sbcB
Name
(GenBank) exonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
pbc  Pseudomonas brassicacearum DF41
Pathway
pbc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CD58_23670 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbc03400]
    CD58_23670 (sbcB)
Enzymes [BR:pbc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     CD58_23670 (sbcB)
DNA repair and recombination proteins [BR:pbc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CD58_23670 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CD58_23670 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CD58_23670 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AHL35687
UniProt: W8PX47
Position
complement(5297728..5299155)
AA seq 475 aa
MTSIFWYDYETTGINPRCDRPLQVAGIRTDFELNEIDAPVNLYCQPSDDILPHPAACAIT
GITPACLAEKGLSEADFMTRVHGQLAAPGTCGAGYNTLRFDDEMTRYSLYRNFFDPYARE
WQGGNSRWDLIDLVRAAYALRPQGIVWPQEEGRVTLKLERLTAANGIDHGQAHDALSDVR
ATIALARLIRQQQPRLYDWLFQLRSKQKVMDQIRLLQPMVHISGRFSAARNYIGVVLPLA
WHPKNRNALIVCDLHLDPQGLLDHDAEVLRQRLYTRREELLEGELPVPLKLIHINKCPVV
APLSVLRAEDQQRLQLDMDGYQERASRLTDAQEVWQEKLQAIYGREDFTASEDPEQQLYA
GFIGDRDRRLCEQVRLADPAQLAHERWPFDDERLPELLFRYRARNFPDTLNPEEQGRWRL
FCQQRLSSPEWGAPNTLNSFDEAMGEWMALSTPLQQEVLMEWQGYSQQLRKRLSL
NT seq 1428 nt   +upstreamnt  +downstreamnt
gtgacttccatcttctggtacgactacgaaaccaccggcatcaacccgcgttgcgaccgg
cccttgcaagtggcgggtatccgtaccgacttcgagctcaatgaaatcgacgcgccggtg
aacctgtattgccagcccagcgatgacatcctgccccatccggcggcttgtgcgatcacc
ggcatcactccggcgtgcctggccgaaaaaggcttgagcgaagccgatttcatgacccgg
gtccacgggcaactggccgctcccggtacgtgtggcgccggctataacaccctgcgcttc
gacgatgaaatgacccgctacagcctttatcggaattttttcgacccctatgcccgggaa
tggcagggcggtaacagtcgctgggacctgatcgacctggtgcgtgccgcctatgcgcta
cgtccgcaaggcatcgtctggccgcaggaggagggccgcgtcaccctcaagctcgaacgc
ctgaccgcggccaatggcattgatcatggccaggcgcatgatgcgttgtcggacgtgcgc
gcgaccatcgccctggcgcgcctgattcgccagcagcagccccggctctacgactggctg
ttccagttgcgcagcaaacagaaggtgatggaccagatccgcctgttgcagccgatggtg
cacatttccgggcgtttctcggcggcgcgcaattatatcggcgttgtcttgccgttggcc
tggcacccgaaaaaccgtaacgccctgattgtctgcgacctgcacctggaccctcagggc
ttgctggaccacgatgccgaggtgttgcgtcagcgtttgtacacacgtcgtgaagaactg
ctcgaaggtgagttgcccgtgccgctcaagctcattcatatcaacaagtgtccggtggtt
gcgccgttgtcggtgctgcgcgccgaggatcaacagcggctgcaactggacatggacggt
tatcaggagcgggcgtcgcgactaactgacgcacaggaagtttggcaggagaaacttcag
gctatttatggccgcgaggatttcaccgccagtgaggatcccgaacaacagttatacgcg
ggcttcatcggcgaccgtgatcgtcgtttatgtgaacaagtccgcctggcggacccggct
caattggcgcatgaacgctggccattcgatgacgagcgcttgccggaattattgtttcga
tatcgcgcgcgcaactttccagacacgttgaatcccgaagagcaagggcgctggagactt
ttctgtcaacaacgtctgtcatccccggaatggggagcgcctaataccttgaatagtttt
gatgaggcgatgggagaatggatggccctctctaccccattgcagcaagaggtactcatg
gaatggcagggctacagccaacaattgcgtaaacggttaagcctttga

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