KEGG T01111: PB000674.02.0

Plasmodium berghei: PB000674.02.0

Entry

PB000674.02.0 CDS T01111

Definition

DNA ligase 1

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

pbe Plasmodium berghei

Pathway

pbe03030	DNA replication
pbe03410	Base excision repair
pbe03420	Nucleotide excision repair
pbe03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:pbe03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:pbe03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pbe03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:pbe03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_OB_2 ICE2

Other DBs

NCBI-GI:

68070421

NCBI-GeneID:

3425646

UniProt:

Q4YVG1

AA seq 897 aa
MKLLLLILLTKMFFCKIKRYMRTEYNYVTPFMKSKLFHNYKNKFNVIILKNIRNNVPNRN
DKYLKCLSFPKKLDGGEQCDTKIEETHVKNEEKEASKRKNTNDDSAKTKKSKVKNENEIK
KGSLFNCKVYEDEKISDLTSPKFNPANFDISNLCLSEKDKIKHKFKDSLLFTFLTNTFNQ
IEELKGSGAGSKKNVAIILSNVFRVLIYYSPNDLIPAVYITLNKVAPDYQNVEAGVGEAL
ILKTMSEAYSRTETSIKKDLQQIEDLGIIAESCSCKMRTIFPLPLTIQSVFNELKSIPNI
SGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVLQALAYAFVLTRPEI
PENIIKDGKMMNEKLLNEQTMVKGDKDNCNDGTTEVKNENDIKLEKQNDTDNKTNMLDID
QFNNLVKSIKIRNERMSKPNLFFNIGKEGDTRLLPIFKELKNAYCDINNDSDIFECMEKS
VKSALCELPNIEMIIQNLLSGDDMNVLMKKCTVKTGVPVQPMLAKPTKGIQEVLDRFNNV
TFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIVKDQIMPGVTESIIDSE
VVAYDIENKKILPFQILTTRKRKDVDIENIKVKICLFPFDLICCNGIPVIKEPLEIRRKL
LYSLLKCKEGVLEYATHSEMNNIDDIDIFLQDAIENNCEGLMVKTLLDNASYEPSRRSLN
WLKVKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLAAYNSETENFQTVCKAGTGFS
DEILNALHESLSDKIIPNKKSYYEVSDKLNPDVWFDAHYVWEIKAADLSLSPVHTAAIGV
YSDDKGIGLRFPRFLRLRDDKNPEQATTAQQIVEFYEAQFASKKNKNNNYNDESGSE

NT seq 2694 nt +upstreamnt +downstreamnt
atgaaattattattactgatacttttaacaaaaatgtttttttgtaaaataaaaagatac
atgagaactgaatataattatgtaacaccatttatgaaaagcaaattatttcacaattat
aaaaataagtttaatgtgataattttaaagaatattagaaataacgtgccaaatagaaat
gataaatatttaaaatgcttatcctttcctaaaaaattggatgggggcgagcaatgcgat
actaaaatagaagagactcatgttaaaaatgaagaaaaggaagcatcgaaaaggaagaat
acaaacgatgacagtgcaaaaacaaagaaatcgaaagtaaagaatgaaaatgaaataaaa
aagggttcgttatttaattgcaaagtttatgaggatgaaaaaataagtgatttaacatcg
ccaaaatttaatcctgccaattttgatataagtaatttatgcttatctgaaaaggataaa
ataaaacacaagtttaaagattccttattatttacatttcttacaaatacatttaatcaa
attgaagaattaaaaggtagtggggcaggaagtaagaaaaatgtagctattattttatca
aacgtatttcgtgttttaatatattatagtcctaatgatttaattccggcagtatacata
actttaaataaagtggcaccagattatcaaaatgtcgaagcaggtgttggtgaggcatta
atattaaaaacaatgtcagaagcatatagtagaactgaaactagtataaaaaaagatttg
caacaaattgaagatttaggaataatagcagaaagttgttcatgcaaaatgagaactata
tttcctttaccattaactattcaatcagtttttaatgaattaaaaagtataccaaatatt
agtggttctaattctcaacaaaaaaaaagagaagtaataaaaaaattattagttagtgca
aaaacatcagaggcaaaatatatagtgcgatttttacaacaacgtttaagaattggtgta
aatagtgctactgttttgcaagctttggcatatgcttttgtattaacacgccctgaaatt
ccagaaaatatcataaaagacgggaaaatgatgaatgaaaaattgctaaatgagcaaaca
atggttaagggtgataaagataattgtaatgatggtacaacagaagtaaaaaatgaaaat
gatataaaattggaaaaacaaaatgatacagataacaaaacaaacatgttggacattgat
caatttaataatttagtaaaatcaataaagatacgtaatgaaagaatgagtaaacccaac
ttgttttttaacataggaaaagaaggagatactcgtttattacctatatttaaagaatta
aaaaatgcatattgtgatataaataacgattcagatatttttgaatgcatggaaaaatct
gtaaaaagtgctttatgtgaattaccaaatattgaaatgattatacaaaatttattaagc
ggtgatgatatgaatgtattaatgaaaaaatgtactgttaaaaccggagttccagtgcag
ccaatgctagctaaaccaacaaaaggaatacaagaagttttagacagatttaataatgtt
acatttacgtgtgaatacaaatatgatggtgaaagagctcaaattcattatattgataaa
gataatataaaaatttttagtagaaatttagaaacaatgacagagaaatatcctgatgtt
attcaaattgtaaaagatcaaataatgccaggtgttactgaatctattattgatagtgaa
gttgtagcatatgatattgagaataaaaaaatattaccatttcaaatattaacaacaaga
aaaagaaaggatgtagatatagaaaacataaaagtgaaaatatgcttgtttccatttgat
ttaatatgttgcaatgggatacctgtaataaaagaaccattggaaattagaaggaagtta
ttatattccttactaaaatgtaaagaaggagtattagaatatgcaacacattcagagatg
aataatattgatgatatagatatatttttacaagatgccattgaaaataattgtgaaggt
ttgatggttaaaactttacttgacaatgcttcttatgagccatcaagacgatcattaaac
tggttaaaggtaaaaaaagattacatagaaggattatcagattcagttgatttagtgcct
atagctggatattatggaaaagggaaaagaagtggggtttatggtgcttttgttttagct
gcatataattctgaaacagaaaacttccagactgtatgtaaagcaggtacaggttttagt
gatgaaatacttaatgcattgcatgaatcattaagtgataaaattatacctaataaaaaa
tcatattatgaagtatcagataaactaaaccctgatgtgtggtttgatgctcattatgta
tgggaaattaaagcagcagacttatcactatcgcctgtccatactgcagctatcggagtg
tattcagatgataaagggattgggttaagattcccaaggtttcttagattaagggatgat
aagaatccagaacaagcaacaacagctcagcagattgtagaattttacgaagctcaattt
gcctcgaagaaaaataaaaataacaattataacgacgaaagtggaagcgaatag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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