KEGG   Acidipropionibacterium acidipropionici ATCC 4875: PACID_08340
Entry
PACID_08340       CDS       T02345                                 
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pbo  Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo00260  Glycine, serine and threonine metabolism
pbo00460  Cyanoamino acid metabolism
pbo00630  Glyoxylate and dicarboxylate metabolism
pbo00670  One carbon pool by folate
pbo00680  Methane metabolism
pbo01100  Metabolic pathways
pbo01110  Biosynthesis of secondary metabolites
pbo01120  Microbial metabolism in diverse environments
pbo01200  Carbon metabolism
pbo01230  Biosynthesis of amino acids
pbo01240  Biosynthesis of cofactors
Module
pbo_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:pbo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PACID_08340 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    PACID_08340 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PACID_08340 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    PACID_08340 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    PACID_08340 (glyA)
Enzymes [BR:pbo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     PACID_08340 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 AA_kinase
Other DBs
NCBI-ProteinID: AFV88672
UniProt: K7S259
Position
complement(942232..943698)
AA seq 488 aa
MPESTYPEPTSINAQAAPAYQTLLDIIGSVEPRIADATRAELHDQRHSLKLIASENYASL
PVLATMGTWFSDKYAEGTIGHRFYAGCQNVDTVESVAAEHARELFGAEHAYVQPHSGIDA
NLTAYWAILAHHVETPALAEFGSKNVNDLSAEDWETLRHRFNDQRAIGMSLDAGGHLTHG
FRPNISGKMFNQRSYGTDPQTGLLDYDKVRELAREFKPLVIVAGYSAYPRRVNFAKMREI
ADEIGAVLMVDMAHFAGLVAGKVFTGDEDPVPNAQVVTTTTHKSLRGPRGGMILVDKEYA
DDVDRGCPMVLGGPLGHVMAAKAVALAEARTQSFRDYAQKVADNSKALAEGLMKRGVKLV
TDGTDNHINLLDVTTSFGLTGRQAESALLDSGIVTNRNSIPADPNGAWYTSGVRIGTPAL
TSRGFGADEFDRVAALIVEALKATTPKTASTGKPGKAKYEMADGVADRVHAEADELVGNF
PLYPGLEL
NT seq 1467 nt   +upstreamnt  +downstreamnt
gtgcccgagtccacttacccggaacccacgagcatcaacgcgcaggccgccccggcctac
cagactctgctggacatcatcggttcggtcgagccgaggatcgcagacgccaccagggcc
gagctgcacgaccagcgtcactccctcaaactcatcgcctccgagaactacgcctccctg
ccggtgctggccaccatgggcacctggttctccgacaagtacgccgagggcaccatcggc
caccgcttctacgccggctgccagaacgtcgacaccgtcgagtcggtggccgccgagcac
gcccgcgagctgttcggcgccgagcacgcctatgtgcagccccattcgggcatcgacgcc
aacctcaccgcctactgggcgatcctcgcccaccacgtggagaccccggccctggccgag
ttcggctcgaagaacgtcaacgacctgtccgccgaggactgggagacgctgcgccaccgg
ttcaacgaccagcgcgccatcggcatgagcctggacgccggaggccacctcacccacggc
ttccgccccaacatctcgggcaagatgttcaaccagcgctcctacggcaccgatccgcag
accggtctgctggactacgacaaggtgcgcgagctggcgcgcgagttcaagccgctcgtc
atcgtggccggctactcggcctacccgcgccgggtcaacttcgccaagatgcgcgagatc
gccgacgagatcggcgccgtgctcatggtcgacatggcccacttcgccggactggtcgcc
ggcaaggtgttcaccggcgacgaggacccggttcccaacgcccaggtggtcaccaccacc
acccacaagtcgctgcgcgggccgcgcggcggcatgatcctggtggacaaggagtacgcc
gacgacgtcgaccgcggctgcccgatggtcctgggcggcccgctcggccacgtcatggcc
gccaaggccgtcgcactggccgaggcccgcacccagtccttccgcgactacgcgcagaag
gtcgccgacaactccaaggccctggccgagggcctcatgaagcgcggcgtcaagctcgtc
accgacggcaccgacaaccacatcaacctgctcgacgtcaccaccagcttcgggctgacc
ggccggcaggccgagtcggcgctgctggactcgggcatcgtcaccaaccgcaactcgatt
cccgcggacccgaacggcgcctggtacacctccggagtgcggatcggcaccccggcgctc
acctcgcgcggattcggcgccgacgagttcgaccgggtcgccgcgctgatcgtcgaggcc
ctcaaggccaccaccccgaagaccgcctcgaccggcaagcccggcaaggcgaagtacgag
atggccgacggcgtcgccgaccgggtccatgccgaggccgacgagctggtcggcaacttc
ccgctctaccccggtctggagctctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (44)   

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