KEGG   Propionibacterium acidipropionici: PACID_21530Help
Entry
PACID_21530       CDS       T02345                                 

Definition
formamidopyrimidine-DNA glycosylase/AP lyase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pbo  Propionibacterium acidipropionici
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pbo00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PACID_21530
Enzymes [BR:pbo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PACID_21530
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PACID_21530
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(2289246..2290103)
Genome map
AA seq 285 aa AA seqDB search
MPELPEVETVRLGLAQTVAGARVRGVDVLDARAVRRHADGPADFADSVTGRRLGTPRRRG
KYLWFPLEVGATSDTACDALLCHLGMSGQFRIDDAQAPLLRHTRVVLDLDGGRQLRFIDQ
RLFGGMQVSRGGGELPGEISHIGPDPFDPAFDAADAGRRLRARRSTLKRALLDQSLVSGI
GNIYADETLWRARRHPETPTSRLRAAEALALYETAREVMAEAIAQGGTSFDRLYVRVNGE
SGYFGRRLDVYGREGSPCRRCGAAILRMSFMNRSSYLCPHCQQKR
NT seq 858 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagctgcccgaggtcgagacggtccgcctcggcctggcgcagacggtcgccgga
gcccgggtccggggcgtcgacgtcctggatgccagggcggtgcgccgccacgccgacggc
cccgccgatttcgccgattcggtgaccggtcgcagactcggtacaccgcggcggcggggc
aagtacctctggtttcccctcgaggtcggcgctacgtccgacacggcatgcgacgcgctg
ctgtgccatctggggatgagcgggcagttccggatcgacgacgcgcaggcgcccctgctg
cgccacacccgggtggtgctcgatctggatggcgggcgccagctgcgcttcatcgaccag
cggctgttcggcgggatgcaggtgagtcggggcggtggcgagctgccgggggagatctcc
cacatcggaccggaccccttcgatcccgccttcgacgcggccgacgccggtcggcgtctg
agggcccggcgcagcaccctgaaacgggcactgctggaccagagcctggtgtcggggatc
ggcaacatctacgccgacgagaccctgtggagggcccggcgccatcccgagaccccgacg
tcgaggctgcgggccgccgaggcgttggcgctgtatgagaccgcccgcgaggtgatggcc
gaggccatcgcccagggcgggacctccttcgaccggctgtacgtgagggtcaacggggag
tcgggatatttcggccgcaggctggacgtctacgggcgcgagggctcgccctgccggcgg
tgcggggctgcgatcctccggatgtccttcatgaaccgctcgtcctatctgtgcccgcac
tgccagcagaaacgctag

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