KEGG T02345: PACID

Propionibacterium acidipropionici: PACID_29610

Entry

PACID_29610 CDS T02345

Definition

DNA ligase D (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

pbo Propionibacterium acidipropionici

Pathway

pbo03410	Base excision repair
pbo03420	Nucleotide excision repair
pbo03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:pbo03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pbo03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:pbo03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_primase_S

Other DBs

NCBI-GI:

410867470

NCBI-GeneID:

13950806

UniProt:

K7RWC6

Position

complement(3117050..3118063)

AA seq 337 aa
MAAESDTDTSDHHEPLLEEGPKSRTVEVDGHRLKLTHLDKVMYPQTGTTKRDVINFYWQV
APRLIEHAHDRPVTRKRWVDGVGTSDEPGESFFQKNAGRDTPDWVPRVSIEYVRKTNEHP
LVNEPAVLVWLGQTATLEIHTPQWRAYSTGRRHRPDRLVLDLDPGEGVELTGCAQVALQA
REVLADIGLDAVPVTSGSKGIHIYAPLDGSWTWKKASESAHRLAQSLEKEHADQVTTSMD
RAERAGKVFIDWSQNNTNKTTVAPWSFRGRLRPTVAVPRLWEEIEDSQLRQLDHSEALER
LNEPDPLSGAIGRLKRGCEPVPAGASSADQLNTITVV

NT seq 1014 nt +upstreamnt +downstreamnt
atggccgcagaatcggacaccgacacttcggaccaccatgagcccttgctggaggaggga
ccgaagtccaggaccgtcgaggtcgacggccaccggctcaagctgactcatctggacaag
gtgatgtacccgcagaccgggaccaccaagcgcgacgtcatcaatttctactggcaggtg
gctccgcggctcatcgagcacgcccacgacagaccggtcacccggaagcgctgggtggac
ggcgtcggcacctcggacgagccgggggagtccttcttccagaagaatgccggccgggac
acgccggactgggtgccccgggtcagcatcgaatacgtgcgcaagaccaatgagcatccg
ctcgtcaacgagccggctgtgctcgtctggctcgggcagaccgcgaccctggagatccac
accccgcagtggcgcgcctacagcacgggccggcgtcaccggccggaccggctggtcctg
gatctggatcctggcgagggggtcgaactgaccggctgtgcgcaggtcgcgctccaggcc
cgtgaggtgctcgccgacattgggctggacgcagtcccggtcaccagcggctccaagggc
atccacatctatgctccgcttgacgggtcgtggacctggaagaaggccagcgagtccgcg
caccggctcgcccagtcgctggagaaggagcacgccgaccaggtgaccaccagcatggac
cgggcggagcgggccgggaaggtcttcatcgactggagccagaacaacacgaacaagacg
acggtggcgccgtggtcatttcgcggccgactgcgccccacggtggcggtgccccggctc
tgggaggagatcgaggattcgcagcttcgccagttggatcacagcgaggcactggagcgc
ctgaacgagcctgatccgctcagtggggcgatcggccggctgaagcgcggctgcgagccg
gtgccggcgggggcgtcgtccgccgaccagctgaacacgatcaccgtcgtgtag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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