KEGG   Parvularcula bermudensis: PB2503_01482Help
Entry
PB2503_01482      CDS       T01298                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pbr  Parvularcula bermudensis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pbr00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PB2503_01482
Enzymes [BR:pbr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PB2503_01482
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PB2503_01482
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(215641..216501)
Genome map
AA seq 286 aa AA seqDB search
MPELPEVETVRRGLAPSMAGAMIERVELRRPDLRFPFPNGFSQRLEGNRILSVDRRGKYL
TLPLSTGETLIMHLGMSGRFLVSGERAPGRFYHASAGDVAHTHVRFTLQIPAEGRGHVAY
ADPRRFGFMDLVASGELATCRHFAQMGPEPLSEAFTPDHLVAEARGRRTPLKSFLLDQST
VAGLGNIYVCEALWRARLSPRRLAASLGPKRATRLVAAIQDALEDAIEAGGSTLRDYHAA
DGAMGYFQHRFDVYDREGEPCRQCGRSISRFAQSGRSTFSCTTCQR
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
gtgcctgagcttcccgaagtcgaaacggtccgccggggccttgccccctcaatggccggt
gccatgatcgagcgggttgagcttcggcgcccggatctccgctttcccttccccaacggc
ttttcccagcgcctggagggcaatcggatcttatctgtggatcggcggggcaaatatctg
accttgcccctctccaccggagaaacgctcatcatgcatttggggatgtccggccggttt
ctggtgagcggtgagcgcgcgccaggtcgcttttatcatgcaagcgcaggggatgttgcg
cacacccatgtgcggtttacgttgcagatcccggcggaggggcgggggcatgtcgcctat
gcggacccgcgtcgctttggctttatggaccttgtggcgagcggcgaactcgccacctgc
cgtcactttgcgcagatggggccagagccgctgagtgaggcgttcacgccagatcacctt
gtggccgaagcgcgagggcgccgcacgccgctgaagagctttcttctggatcagtcgacg
gttgcggggcttggcaatatctatgtgtgtgaagccctgtggcgggcgcgtctctccccg
cgccgcctcgcggcgagtcttgggccaaaacgggcgacgcgcttggtcgcggccattcaa
gacgcgctggaagacgccattgaggcggggggatcgacgctacgggactaccacgccgca
gacggggcgatggggtatttccaacatcggttcgatgtctatgacagagagggcgagccc
tgccggcaatgtggtcgatcgatcagtcggttcgcgcaatcgggccgatcgacattttcc
tgcaccacatgccaaagatag

DBGET integrated database retrieval system