KEGG T01298: PB2503

Parvularcula bermudensis: PB2503_08934

Entry

PB2503_08934 CDS T01298

Definition

2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase

Orthology

K00382

dihydrolipoamide dehydrogenase [EC:1.8.1.4]

Organism

pbr Parvularcula bermudensis

Pathway

pbr00010	Glycolysis / Gluconeogenesis
pbr00020	Citrate cycle (TCA cycle)
pbr00260	Glycine, serine and threonine metabolism
pbr00280	Valine, leucine and isoleucine degradation
pbr00620	Pyruvate metabolism
pbr01100	Metabolic pathways
pbr01110	Biosynthesis of secondary metabolites
pbr01120	Microbial metabolism in diverse environments

Module

pbr_M00307

Pyruvate oxidation, pyruvate => acetyl-CoA

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:pbr00010]
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pbr00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:pbr00620]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:pbr00260]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:pbr00280]

SSDB

Motif

Pfam:

Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA HI0933_like FAD_binding_2 FAD_oxidored DAO NAD_binding_8 FAD_binding_3 K_oxygenase Thi4 AlaDh_PNT_C Lycopene_cycl NAD_binding_7 UDPG_MGDP_dh_N 3HCDH_N

Other DBs

NCBI-GI:

304321339

NCBI-GeneID:

9710006

UniProt:

E0TCF0

Position

1779059..1780471

AA seq 470 aa
MSQSFDVVVIGGGPGGYNAAIRAAQLGLSVACIEKRPSGRFGGTCLNVGCIPSKAMLHAS
EAYAHAKSHLKELGVKVSGVELDLPAMLGQKDDAVQGLTDGIAYLFKKNKVTGLKGHGRI
EGPGKVILTDEDGKEEPLSASTIVIATGSSVMSLPNVEIDEDVIVSSTGALELKKVPDHM
VVVGGGYIGLEMGSVWRRLGAKVTVVEYLDRITPGMDGEVSKQFMRILKKQGMEFKLGTK
VTGIEKTKQGATLSLEPAAGGEKETLEADVVLIAIGRKPHTEGLGLDTVGIKTNDRGFIP
VDDHYQTGVDGIYAIGDVTPGPMLAHKAEDEAVAVAEIIAGKGGHVNYDVIPGVVYTDPE
VAMVGKTEEQLKDEGVAYKVGKFPFTANSRAKTNHETDGFVKVLADAETDKVLGVHMIGT
GVGEMIAEACLVMEFGGSSEDIARTCHPHPTRTEALRQAAMGVEGWTMQA

NT seq 1413 nt +upstreamnt +downstreamnt
atgtcccagtccttcgacgtcgtagtcattggggggggacctggcgggtataatgccgcc
atacgggccgcgcagttgggcctctcggtggcgtgtatcgaaaagcgccccagcgggcgg
ttcggcggcacttgcctcaatgtcggctgtattccttcaaaagcgatgctccatgcttcc
gaggcctacgctcatgcgaaatcccatctgaaggagttgggcgtcaaggtctccggcgtg
gaactcgatcttcccgccatgctcggccaaaaggatgacgcggttcaggggcttacggac
gggatcgcgtatctcttcaaaaagaacaaagtcacgggccttaaggggcatgggcggatc
gaaggccctggcaaggtcattttgaccgacgaggacggtaaggaagaaccgctgagcgcc
tcgacgatcgtcatcgccaccggctcgtcggtcatgtcactgccgaatgtcgagatcgac
gaagacgtgatcgtctcctctaccggggcccttgagttgaaaaaggtgcccgaccacatg
gtcgtggtggggggcggctatatcgggcttgaaatgggctcggtgtggcgccgccttggg
gccaaggtgaccgtggtcgaatatctcgaccgcatcacgccgggtatggacggtgaagtt
tccaaacaattcatgcgtatcctgaagaaacagggaatggaattcaagctcggcacgaag
gtgacggggatcgagaaaacaaagcaaggggccaccctgtccctggaacccgccgccggc
ggggaaaaagagaccttggaagccgatgtcgtcctgattgcgattgggcggaagccgcat
actgaagggttggggctcgacactgtcggcatcaagaccaatgaccgggggttcattccg
gtggacgatcattaccagaccggtgtcgatggcatctatgccatcggcgatgtcaccccc
ggtccgatgctggcccacaaggctgaggacgaagccgtcgcggtggccgaaatcatcgcc
ggcaaaggcggtcacgtgaattacgatgtgatccccggcgtggtctataccgatcccgaa
gtcgccatggtcggcaagaccgaggagcaattgaaggatgagggggtcgcctacaaggtg
gggaaattcccctttaccgcgaatagtcgggccaagacgaatcacgaaacggacggcttt
gtgaaagtgctggcggatgccgaaaccgacaaggttctcggtgttcatatgatcggcacc
ggggtcggcgaaatgatcgccgaagcctgtcttgtgatggagttcggcggctcttcggag
gatatcgcccgcacctgccatcctcatccgacccgtaccgaagcgctgcgtcaggcggcg
atgggggtcgagggctggacgatgcaagcctag

All links

Pathway (9)   
   KEGG PATHWAY (8)   
   KEGG MODULE (1)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (47)   

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