KEGG   Rubinisphaera brasiliensis: Plabr_4488
Entry
Plabr_4488        CDS       T01431                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
pbs  Rubinisphaera brasiliensis
Pathway
pbs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Plabr_4488
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbs03019]
    Plabr_4488
   03016 Transfer RNA biogenesis [BR:pbs03016]
    Plabr_4488
Enzymes [BR:pbs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Plabr_4488
Messenger RNA biogenesis [BR:pbs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Plabr_4488
Transfer RNA biogenesis [BR:pbs03016]
 Prokaryotic type
  tRNA degradation factors
   Plabr_4488
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase KH_2
Other DBs
NCBI-ProteinID: ADY62060
UniProt: F0SLF4
Position
complement(5569609..5571744)
AA seq 711 aa
MVKTATSVEREIAGRIFKFSTGEIAKQASGAVLAQFGDTVLLVAAQTGPAREGIDFFPMT
VDYRERFAAAGKFPGGFLKREGRPSTHEILTARLTDRPLRPLFPKSFHDEVQVQSIVLSS
DGENPSDVVSINGASAALSLSPVPFQGPIGAVRVGMIEGEFILFPTKEQIDQGDLDLVVA
GNKESILMIEGFGRQIPEDVMADALMFAHKGIIELCELQEELVKAAGVEKFEWEEPAENP
FIGEVRELAASKLKAARTNSEKQKRSEAAAAVKEELIEKFFPEGATEDEQGRTLAQLKDA
IYKVDKQACRDLTIEGKRLDGRGPTDLRQISCKVGLVPRVHGSALFTRGETQSLASLTLG
TVRDQQRVEDLFGEHTKRFMLDYNFPSYSVGEVRPIRGPGRREIGHGALAERSVQWVLPD
ESAFPYTIRIISDITESNGSSSMASVCNATLALMDAGIPIRQPVAGISIGLVKDGDKYTL
LTDIMGDEDHFGDMDFKIAGTQKGITGIQLDLKIDGINEEIIRGTLEQARKARLELLKAM
LTEIRRPRKEISMLAPRILTCKIDPEKIGLLIGPGGKNIRQLQEDTGTQIDIEEDGTVTI
ASSSGEGAEAAKARIEAMTEEVRVGRVYNGTVIAIKDFGAFIEIAPGKDGLCHISELSDG
FVKNVGDVCKIGDKMEVKVIAVDEQNRVKLSRKALMATEAEDGDDDEDDDA
NT seq 2136 nt   +upstreamnt  +downstreamnt
gtggtaaaaacagcgaccagtgtagaacgagaaattgccggccggatcttcaagttctcc
acaggagaaattgcgaagcaggccagcggggctgtgctcgcacaatttggtgacacggtc
cttctcgtggctgcccagaccggccccgctcgcgaagggatcgatttcttcccaatgacc
gtggactaccgggaacgcttcgcagccgccggtaaattccccggcggattcctcaaacgg
gaagggcgtccttcgactcacgaaatcctgaccgcgcgtctgaccgaccgcccgctccgt
ccgctgttcccgaaatccttccatgacgaagttcaggtgcagtcgattgttctctccagc
gatggcgaaaacccgtccgacgtcgtctcgatcaacggtgccagcgccgctttgagcctg
tctcctgtccctttccaggggccaattggagccgttcgcgtcggcatgatcgaaggcgaa
ttcatcctgttcccgaccaaagagcagatcgaccagggggacctggatctggttgtggcc
ggtaacaaagaatcgatcctgatgatcgaaggtttcggccgtcagattcctgaagacgtg
atggcagacgctctgatgttcgcccacaaaggcatcatcgagctgtgcgaactgcaggaa
gaactggtcaaagccgccggcgttgagaagttcgaatgggaagaaccagccgagaatccg
ttcatcggcgaagttcgcgaactggctgccagcaagttgaaagcagcccgcacgaactca
gaaaagcagaaacgttctgaagctgcagctgctgtcaaagaagagctgatcgaaaagttc
ttcccggaaggggcgaccgaagacgagcagggccgcactctggctcagttgaaagatgcg
atctacaaagtcgacaagcaggcctgccgcgatctgaccatcgaaggtaagcgtcttgat
ggccgtggtccgaccgatctgcgtcagatcagctgcaaagtcggtctcgtgcctcgcgtg
cacggttccgccctgttcactcgtggcgaaacccagtctctggcatcgctgacactcggt
accgtccgtgatcagcagcgggtcgaagacctgttcggcgagcacaccaagcgattcatg
ctggattacaacttcccgtcatactcggtcggcgaagttcgtccaattcgtggaccagga
cgtcgtgaaattggtcacggtgctctggctgaacgttcggttcagtgggttctgcccgat
gaatcagccttcccgtacacgatccgtatcatttcggacattaccgaatccaacggcagt
agctccatggcttctgtctgtaacgccacattggcgttgatggatgccggtattccaatt
cgccagccggttgccggtatttccattggtctggtcaaagacggtgacaagtacaccctg
ctgaccgacatcatgggtgacgaagatcactttggcgacatggacttcaaaattgccggt
acccagaaagggatcaccgggatccagctcgacctcaaaatcgacggtatcaacgaagaa
atcattcggggcactctggagcaggctcgcaaagcccgcctggaactgctcaaagcgatg
ctgaccgaaattcgtcgtccgcggaaagaaatttccatgctggctccgcgaattctcacc
tgcaaaatcgatccagagaaaatcggtctgctgatcggcccgggtggtaaaaacatccgt
cagctgcaggaagataccggtactcagatcgatatcgaagaagacggaaccgtcaccatt
gcttccagctctggcgaaggggcagaagcagccaaagcccgcatcgaagccatgaccgaa
gaagttcgcgtcggccgggtctacaacggtaccgttattgcgatcaaagacttcggtgcc
ttcatcgaaatcgcaccaggcaaagacggtctgtgtcacatcagcgaactgtctgacggc
ttcgtgaagaacgtcggcgatgtctgcaaaatcggcgacaagatggaagtcaaagtcatc
gctgttgatgaacagaatcgcgttaaactgtctcggaaagctctgatggcgaccgaagca
gaagacggcgacgacgacgaagatgacgatgcataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (49)   

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