KEGG   Paenibacillus bovis: AR543_18155
Entry
AR543_18155       CDS       T04407                                 
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
pbv  Paenibacillus bovis
Brite
KEGG Orthology (KO) [BR:pbv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbv03400]
    AR543_18155
Enzymes [BR:pbv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AR543_18155
DNA repair and recombination proteins [BR:pbv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     AR543_18155
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 DEAD AAA_22 AAA_12 AAA_16
Other DBs
NCBI-ProteinID: ANF98894
UniProt: A0A172ZML4
Position
complement(4282318..4286358)
AA seq 1346 aa
MPRPIDSTWTEDQWKAISLRGGNMLVAAAAGSGKTAVLVERIIRQVTDTAHPLDVDRMLV
ATFTKAAATEMRQRIRAALDKEVLQRPEDERLRRQLALLGQASITTLHSFCLEVIRRYYS
LIPLDPGFRIASENESRLLRQELLEELFEEKYGEEEERDSKQFHRLMNWFGGERSDDAAI
VLVERLYHFARSHPWPEHWLRQTAAHFEAADGAALQNTPWVSYIMQDIRVSLEGMEALLR
QGIDTARLPGGPAAYADSLNEDLELIHQLQDAVMQQPWTALYLTFQNAGFGKLKAVRKEG
IDPNLQETVKQLRENAKKSLADLKTSFFGRTPDEFAQELREAAPLMSELSELVIRFSDKY
QQEKQRRGWVDFSDLEHYALQILRDPASVPDHVLPSAAALEYQERFDEVMLDEYQDTNSV
QEQLIRLISRSEQGNRFMVGDVKQSIYRFRLAEPRLFMEKYHTYSEDWQGEGRRIDLSRN
FRSRQQVVDAVNMIFRQVMNEKVAEIRYDERAELVAGAQYPPGEEKAYAPEFWLIDRAGA
ERTADNEDPAELPAGSAADEAELEAARLEAQAIAARVREMVSPDGRPLMIYDKSVDGLRP
AEYRDMVILLRSVSIWAPMIVEELQLLGIPAYSDLEQGYFEAVEVDIMLSLLEIIDNPQQ
DIPLASVLRSPIVGLNEDELAAIRLFGKDISYYDAMLLASEQAEEHPGSWNSKLLRFMEQ
LSNWRARAREEELGELIWRIYRETGYVDWLGGLPGGIQRQNNLRILYDRARQFERSTSSR
GLFRFLRFIRRLKDNGGDLGSAVSGTQENAIRVMTIHKSKGLEFPVVFLAGMSKMFNMQD
LNASFLMHKELGFGPKFVDEDTRVSYPTLPNLAIRRQALNELLAEEMRVLYVALTRPRDK
LIMIGTVRGLDKKISAWSQIQNSEQLELPDYLLARGRSYLDWLGLAMMRHRSAAIFRERN
EAAAGPYSDCLAADPSDWQIRIIDSRELRVADENDELSYAGPRDNDPKWQALREKSEVTL
SQIRDHLDTDTDTDTDTDTDTDTDTDTDTDTDTDTDTDNWQSIVYDRLSWQYPYENAVHT
PAKTTVSELKRQLATEDAPDADLWEGIWNLQPLLNSFANRKAETNDTEASLSSSEPIAAA
DNDIAVDAIADSQTSSLYNDGTLKLQRPKFMEKRGLSGAERGTAYHTMMQRIPLQAGPID
TALVDQIRDQLVQLQILTQPEANAVKTADITAFFASELGQRLIHSEWIRREMPFSYGIPV
NEQNDIMLTQGIVDCLFREGEQTILIDYKTDRIAAHEGGLESLEQRYRLQLELYAQAVEE
SLGQPVNELWLYFFDGARAVRLNADK
NT seq 4041 nt   +upstreamnt  +downstreamnt
atgccaagaccgatagacagcacctggactgaagaccaatggaaagccatctccctgcgt
ggcggcaatatgctcgtcgctgctgcagccggctccggcaaaacagcagttctggtggag
cggatcattcgccaggtgacggatacagcacatccacttgatgtagatcggatgcttgta
gctacctttaccaaagcggcagcgaccgagatgcgtcagcggattcgggctgcactcgac
aaagaagtgctacagcgtccggaggatgagcgattgcgccgtcaattggcgctgctgggt
caagcttcgattacgacgctgcactccttttgcctggaagtgattcgtcgttattattca
ctaattcctctggaccctggatttcggattgccagcgagaatgaaagcagactgctgcgt
caggaacttttggaagaactgttcgaagaaaaatatggcgaagaagaggaacgcgattcc
aagcagtttcatcgtctgatgaactggttcggcggagagcgaagtgatgatgcagcgatt
gtactggttgaacggctgtatcattttgcccgcagtcatccatggcccgagcactggttg
cgtcagacagctgcccatttcgaagctgccgatggagcagcgctgcagaatactccgtgg
gtgagttatattatgcaggatatcagagtatcgctggaaggcatggaagcactgctgcgt
cagggaatagacacggcgcgcctgccaggcggtccggctgcttacgcagacagcttgaat
gaagatctggaattgattcatcagctccaggatgcagtgatgcagcagccgtggacagca
ttgtatctgactttccaaaatgccggattcggcaagctcaaagctgtacgcaaggaaggc
attgatcccaatctgcaggagaccgtcaagcagctgcgggaaaatgccaaaaaatcgttg
gcagatctgaaaacgtccttttttggacgtaccccggatgaatttgcccaggaattgcgc
gaagcggctcccttaatgagcgaactgtccgagctggttattcgatttagcgataaatat
caacaggagaaacagcgtcgcggttgggtcgatttttccgatctggagcattatgccctg
cagattctgcgcgatccggcatctgtgcctgatcatgtgctgccttctgcagccgcgctg
gagtatcaggagcgattcgatgaagtcatgctggatgaataccaggataccaactcggtt
caggaacagctgattcgtctgatttcccgttctgaacaggggaatcgctttatggtaggt
gatgtgaagcagagcatttatcgcttccgtctggctgaaccgagattatttatggaaaag
tatcatacctatagtgaagactggcagggtgagggacgtcgtatagatctgtctcgtaac
ttccgcagtcgtcagcaggttgtcgatgcggtcaatatgattttccgtcaggtgatgaat
gagaaggttgccgagattcgttatgatgaacgtgctgagttggtggcaggtgcgcagtat
cctcctggggaagaaaaggcctatgcaccagaattctggctaattgaccgggcaggtgct
gagcgaacagcagataatgaagatccagcggaactgcctgcaggatctgctgccgatgaa
gcagaactggaagcggcacgtctggaagcacaggctattgcagctcgtgttcgcgagatg
gtatcaccggatggtcgtccactgatgatttatgataaaagtgtcgatggactgcgccct
gccgaatatcgggatatggttattttgctgcgctcggtatccatatgggcgcctatgatt
gtggaagaactgcagctgcttggtattcctgcttacagtgatttggaacagggctatttt
gaagccgtagaagtggatattatgctgtcgctgctggaaattatcgataacccgcagcag
gatattccacttgcttcggtattgcgttctccaatcgttggactgaacgaagatgagctg
gcagctatccgtttatttggcaaggatatatcttattacgacgcgatgctgctggcgtcc
gagcaagcggaagaacatccgggcagctggaatagcaagcttcttcgttttatggaacag
ctgtccaattggcgtgcccgggcgcgggaggaagagctgggagaactgatctggcggatt
taccgggagaccggttatgtcgattggctgggtggactgcctggcggtatccagcggcaa
aacaatctgcgtattctgtatgatcgtgcccggcagtttgaacgctctacctcatcccga
ggcttgttccgtttcctgcgctttatccgcagactcaaagataatggcggcgacctggga
tccgccgtgtcaggaacgcaggagaatgcgattcgagttatgacaattcacaaaagtaaa
ggattggaattcccggtcgttttcctcgctggcatgtccaaaatgttcaatatgcaggat
ctgaatgcttctttcctgatgcataaggaacttggatttggtcccaaattcgtggatgaa
gatacacgggtcagttatccaacgctgcccaatttggcgattcgccgtcaggcactcaac
gaactgctggcagaagagatgcgcgtactctatgtcgcattgacacgtccaagggacaag
ctgatcatgatcggaaccgtacgtggactggacaagaaaatctcggcctggagccagatt
cagaattcggagcagctggagctgccggactatttactggcacgtgggcgcagctatctg
gattggctcggtctggcgatgatgcgtcatcgttcggcggccatattccgtgaacgaaat
gaagcagcagccggtccgtattccgactgtctggcagctgatccatccgactggcagatt
cgtattatcgacagccgcgagctgcgcgttgccgatgagaatgatgaattgagctatgca
ggtccgcgtgataatgatcccaaatggcaggcactccgggaaaaaagtgaagtgacactg
tctcaaatccgcgaccatttggatacagatacagatacagatacagatacagatacagat
acagatacagatacagatacagatacagatacagatacagatacagatacagataactgg
caaagtatcgtttatgatcgtctatcctggcagtatccttatgagaatgctgtgcacacc
cccgccaagactactgtcagtgagctaaaaagacagctggcgacggaagatgctcctgat
gcagatttatgggaaggcatctggaatctgcagccgctgctgaattcatttgctaatcga
aaggcagaaacgaacgatacagaagcatctctatcttcttcggagccgattgcagctgcc
gataatgatatagcagttgatgccatagctgatagtcagacatccagtctgtacaatgac
ggcacactcaaactgcagcgtcccaaatttatggaaaagcgcggtctgagcggagccgag
cggggaacagcttatcatactatgatgcagcgtatccctcttcaggcgggtccgatcgat
acagcgctagtggatcagatcagagaccaactggtacagctgcagattttgacccaaccg
gaagccaatgcagtgaaaacggcagacattaccgccttttttgccagcgagcttggtcag
cgtcttatccattcagagtggatcaggcgtgaaatgccttttagctatggaatccctgta
aatgaacaaaacgatatcatgcttacccaggggattgtcgattgtctgttccgcgaaggc
gaacaaacgattctgatcgattacaaaaccgatcgtattgcagctcacgaaggtggcctg
gaatctttggaacagcggtatcggcttcagcttgaactatatgcacaggctgttgaagaa
tcacttggacaacctgtaaatgaattgtggctgtacttttttgatggtgcacgggcagta
aggctcaatgccgacaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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