KEGG   Pseudoalteromonas sp. Bsw20308: D172_002595
Entry
D172_002595       CDS       T04175                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
pbw  Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:pbw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pbw03009]
    D172_002595
   03016 Transfer RNA biogenesis [BR:pbw03016]
    D172_002595
Enzymes [BR:pbw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     D172_002595
    5.4.99.29  23S rRNA pseudouridine746 synthase
     D172_002595
Ribosome biogenesis [BR:pbw03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    D172_002595
Transfer RNA biogenesis [BR:pbw03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    D172_002595
SSDB
Motif
Pfam: PseudoU_synth_2 Glyoxalase_3 PHA-1
Other DBs
NCBI-ProteinID: ALQ07046
Position
complement(612543..613196)
AA seq 217 aa
MLVNYNPPMNPYLTILYQDDDLLIVNKPSELLTVPGKDPKHADSLINRVNRVFPTAKIVH
RLDMATSGILCLAMNKVAHRHLSMQFQERETAKRYIARVFGQLEVDTGTVDLPLICDWPN
RPKQMVDHENGKPSLTHFKILEREADATRVELTPITGRSHQLRVHMLSLGHPILGDRLYA
HKDALAAAPRLQLHAQMLKLKHPTTEQVLTFEAEPEF
NT seq 654 nt   +upstreamnt  +downstreamnt
gtgttagttaattacaatcccccaatgaatccgtatttaacaatactgtatcaagatgac
gacttgctcatcgttaataaacccagtgagttattaaccgtcccgggtaaagatcctaaa
cacgccgacagcttaattaaccgtgttaatcgtgtttttccgacagctaaaatagttcat
cgtttagatatggcaacatcaggcatactttgccttgctatgaataaagtagcgcacagg
catttaagtatgcagtttcaagaacgcgaaacagctaagcgttatattgcacgtgtattt
gggcagcttgaggtcgatacgggaaccgtggatctgccgcttatttgtgattggcctaat
cgcccaaaacaaatggttgatcacgaaaatggtaagccatcgcttacgcactttaaaata
cttgagcgcgaagccgatgctacccgtgtagagctaacgccaataactgggcgctcacat
cagttacgtgtacatatgctaagtttaggacatcctattttaggtgataggctctatgcc
cataaagacgcacttgccgcagctcctcgcttacaattacacgcacaaatgctgaagttg
aagcaccctacaactgagcaagtacttacatttgaagccgaacctgagttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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