KEGG   Pseudoalteromonas sp. Bsw20308: D172_012575
Entry
D172_012575       CDS       T04175                                 
Symbol
rnhB
Name
(GenBank) ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
pbw  Pseudoalteromonas sp. Bsw20308
Pathway
pbw03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pbw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D172_012575 (rnhB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbw03032]
    D172_012575 (rnhB)
Enzymes [BR:pbw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     D172_012575 (rnhB)
DNA replication proteins [BR:pbw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     D172_012575 (rnhB)
   Elongation factors (archaeal)
     D172_012575 (rnhB)
SSDB
Motif
Pfam: RNase_HII
Other DBs
NCBI-ProteinID: ALQ08805
Position
complement(2864036..2864638)
AA seq 200 aa
MQIDRPNVTLIAGVDEVGRGPLVGDVVTAAVILDPTKPIAGLADSKKLTDKKRQALAIEI
KEKALCYAYGRCSPTEIDELNILHATMLAMTRAVEALSTQPEFVFIDGNRLPKLTMPAQA
VVKGDSLVAEISAASILAKVARDDEMLELDKRHPEYGFAGHKGYPTKAHFAALEQYGAID
EHRKSFKPVQRVLAQANGEG
NT seq 603 nt   +upstreamnt  +downstreamnt
atgcaaattgatagaccaaatgtaaccctaattgccggtgtagatgaagttgggcgcggc
ccgcttgttggtgatgtagttactgccgccgttattttagatcccactaaacctattgct
ggcttagcggattctaaaaaattaacggataaaaaacgccaagcactggcaattgaaatt
aaagaaaaagcattgtgttacgcgtatggtcgctgcagtccaacagaaattgatgaatta
aatattttacacgcgactatgcttgccatgactcgcgcagtggaggcattaagtacgcaa
cctgaatttgtatttatagatggtaatcgcttgccaaaactcactatgccagcgcaagct
gttgttaaaggcgatagcctagtggcagaaatttcagccgcgtctattttagctaaagta
gcgcgcgatgacgaaatgcttgagcttgataaacgccaccctgaatatggttttgcaggg
cataaggggtatccaactaaagcgcattttgcagcgcttgagcagtacggcgcgattgac
gagcatcgtaaaagctttaaacctgtgcagcgtgtattggcgcaagccaatggtgagggc
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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