KEGG   Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_001450Help
Entry
PCC21_001450      CDS       T02320                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pcc  Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pcc00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PCC21_001450
Enzymes [BR:pcc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PCC21_001450
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PCC21_001450
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
155952..156761
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGISPYLVDHTILYAEVRNSRLRWPVSAEILSLSDEPVLSVRRRAKYLL
IELTRGWIIVHLGMSGSLRVLPEYSEPEKHDHVDLVMDSGKVLRYTDPRRFGAWLWTDNP
ETCSVLAHLGPEPLEAEFSADYLYQISRGKKTAIKQWIMDNKVVVGVGNIYASESLFAAG
IHPDRAAGSLNENDAAVLVGVIKQVLQLSIEQGGTTLRDFLQSDGKPGYFAQELRVYGRN
GEPCRTCGTLIETAKHGQRSTFFCRRCQK
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaggttgaaaccagtcgtcggggaatttcaccgtatcttgtcgat
cacaccatcctttatgctgaagtgaggaactcgcgcctgcgctggccggtatcggctgag
attctctctctgagcgatgaaccggtgctcagtgtgcgtcggcgggcaaaatatctgctg
attgagctgactcgcggctggattattgtgcatctcggcatgtctggcagcctgcgggtg
ttgccggaatatagtgagccggagaaacacgatcatgttgatttggtgatggacagcggt
aaggtgctgcgttacaccgatccccggcgttttggtgcctggctgtggacggataatcca
gaaacttgttctgtattggcgcacttgggccctgagccgttagaggcggaattctctgcc
gattatctttatcagatttcacgcggtaaaaagacggcaatcaaacaatggattatggat
aacaaagtcgtcgttggcgtaggcaatatttacgcgagcgaatcgctgtttgctgcgggt
atccatcctgacagagctgctggatcgctaaatgaaaatgacgcagccgtattggtgggc
gtgattaaacaggtgctacagctttcgattgagcaggggggcacaacactgcgtgacttt
ttgcaatcagacggcaaacccggttattttgcgcaggagctgcgagtctatggccgcaac
ggtgaaccttgtcggacatgcggaacattgatcgaaaccgcgaagcatgggcagcgcagc
acgtttttctgtcgtcgctgccagaagtaa

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