KEGG   Pseudomonas chlororaphis PA23: EY04_01305
Entry
EY04_01305        CDS       T03201                                 
Name
(GenBank) tRNA s(4)U8 sulfurtransferase
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
pch  Pseudomonas chlororaphis PA23
Pathway
pch00730  Thiamine metabolism
pch01100  Metabolic pathways
pch01240  Biosynthesis of cofactors
pch04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:pch00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    EY04_01305
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    EY04_01305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pch03016]
    EY04_01305
Enzymes [BR:pch01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     EY04_01305
Transfer RNA biogenesis [BR:pch03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    EY04_01305
SSDB
Motif
Pfam: ThiI THUMP QueC Rhodanese tRNA_Me_trans
Other DBs
NCBI-ProteinID: AIC17550
Position
312646..314100
AA seq 484 aa
MKLIVKVFPEITIKSRPVRTRFIRQLAKNIRAVLRDLDPAVVVNGVWDNLELETAVSEPK
ALKEMTERLSCMPGIAHFLQVDEYPLGDFDDIVAKCKQHFGEALAGKVFAVRCKRAGKHE
FSSMDVEKYVGSQLRRQCGAAGISLKEPAIEVRMEIRDQRLFVIHSQHNSIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHYIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVILKRMMLRAASSIADRLHIDALVTGEAISQVSSQTL
PNLSVIDCVTDKLVLRPLIASHKQDIIDLANEIGTADFAKHMPEYCGVISVNPKTHAKRH
RVEHEEKEFDMAVLERAIERAKLVPIDRVIDELGQDLQIEEVSEALAGQIVIDIRHPDAQ
EDDPLELAGIEIKALPFYALNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgaaactaatcgttaaagttttcccggaaatcaccatcaagagccgcccggtacggacg
cgtttcatccgtcagttggccaagaacatccgtgccgtgctccgcgatctggacccggcc
gtggtggtcaatggtgtgtgggacaacctcgagctggaaaccgccgtcagcgagccgaaa
gccttgaaggagatgaccgagcgcctgagctgcatgccgggcatcgcgcatttcctgcag
gtcgatgaatacccgctgggcgacttcgacgacatagtcgccaagtgcaagcagcacttt
ggcgaggccctggcggggaaagttttcgccgtgcgctgcaagcgcgccggcaagcatgaa
ttcagctccatggacgtggagaaatacgtcggcagccagctgcgtcggcagtgcggcgcc
gccggaatttccctgaaagagcctgcaatcgaagtgcggatggaaattcgcgaccaacgg
ttgttcgtgatccacagccagcacaacagcatcggcggttatccgctgggcgccctggaa
cagaccctggttttgatgtccggcggtttcgattccacggtggcggcctaccagatcatg
cgtcgcggcctgatgagccacttctgcttcttcaacctgggcgggcgtgcccacgaattg
ggcgtgatggaagtcgcgcactatatctggaagaagtacggcagctcccagcgcgtgctg
ttcgtcagcgtgccgttcgaggaagtgctcggcgaaatcctcggcaaagtcgacaacagt
catatgggcgtcattttgaagcgtatgatgttgcgtgccgcgtcgagcatcgccgaccgc
ctgcacatcgacgcgctggtcaccggcgaggcgatttcccaggtgtcgagccagaccctg
ccgaacctctcggtcatcgactgcgtaaccgacaagctggtgctgcgcccgctgatcgcc
agccacaagcaggacatcatcgacctggccaacgaaatcggcaccgccgacttcgccaag
cacatgccggagtactgcggggtcatctcggtgaaccccaagacccacgccaagcgccat
cgcgtggagcacgaagagaaagaattcgacatggcggtgctcgagcgtgcgatcgagcgg
gccaaactggtgccgatcgatcgggtaatcgacgaactgggccaggatttgcagatcgaa
gaagtcagcgaggcgctggcggggcagatcgtgatcgacatccgtcatccggatgctcag
gaagacgacccgctggagttggctggcatcgagataaaagcgctgccgttctatgcattg
aatgcacgcttcaaggaactggaccctactcgccagtacctgctgtattgcgacaaaggc
gtcatgagtcgcctgcatgctcaccatctgctcagtgagggacatgccaatgtgcgcgtt
tatagaccgagctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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