KEGG   Pseudomonas chlororaphis PA23: EY04_30155
Entry
EY04_30155        CDS       T03201                                 
Name
(GenBank) type VI secretion protein
  KO
K11895  type VI secretion system protein ImpH
Organism
pch  Pseudomonas chlororaphis PA23
Pathway
pch02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pch00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    EY04_30155
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pch02044]
    EY04_30155
Secretion system [BR:pch02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   EY04_30155
SSDB
Motif
Pfam: T6SS_TssG HalOD2
Other DBs
NCBI-ProteinID: AIC23022
UniProt: A0A0E1EHL4
Position
6604502..6605509
AA seq 335 aa
MDTTYGSTAPALSGLTRVIREYSLFQAVLLVVDRLRDSHPGLSEEDLYDQLEFQANPSLG
FPGSDVDRVEFFEEHGQMRARLRFNLIGLFGSGSPLPAFYGEQALGDSEDGNPTRNFLDL
FHHRLQRLMLPIWRKYRYRASFKSGALDPFSAQLFALIGLGGEDIRKAKELNWKRLLPYL
GLLSLRAHSAALIEAVLRYYFKHADLVIEQCIERRVEILEEQRNRLGRANSQLGEDLVLG
ERVRDRSGKFRIHIRQLDWQRFHEFLPIGFGYQPLCALVRFTLRDPLDYDIRLVLRQEEI
RELRIGEQNACRLGWTSWLGRERADGVVTLGSKIH
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggacaccacgtatgggtctacagcccctgctttaagcgggctgacccgggtcatccgc
gagtactcgctgttccaggccgtgctgctggtagtggaccggctgcgcgattcccatccg
ggcctaagcgaagaggatctctacgaccagctggaattccaggccaatccgagcctgggt
ttccctggcagcgacgtcgatcgcgtggagtttttcgaagagcacgggcagatgcgcgcg
cgcctgcgcttcaacctgatcgggctgttcggctccggctcgccgctgccggcgttctac
ggtgagcaggccctgggtgacagcgaggacggcaacccgacccgcaatttcctcgacctg
ttccaccatcgcctgcagcggctgatgctgccgatctggcgcaagtaccgctaccgcgcc
agcttcaagagcggcgcgctcgacccgttttccgcccagctgttcgccctgatcggcctc
ggcggcgaagacatccgcaaggccaaggaactgaactggaagcgcctgctgccgtacctc
ggcctgctcagcctgcgggcccactcggcggcgctgatcgaggccgtgctgcgctactac
ttcaagcatgcggacctggtgatcgagcagtgcatcgagcgtcgggtggagattcttgag
gagcaacgcaaccgcctgggtcgcgccaacagccagctcggcgaagacctggtgctgggc
gagcgggtgcgcgaccgcagcggcaagttccgcatccatatccgccagctcgactggcag
cgcttccacgaattcctgccgatcggtttcggctaccagccgctgtgcgcgctggtgcgg
ttcaccctgcgtgacccgctggactacgacattcgcctggtcctgcgccaggaagaaatc
cgcgaactgcgcatcggtgagcagaacgcctgtcgcctggggtggaccagttggctcggc
cgcgaacgcgcggacggcgtggtgaccctgggcagcaaaattcattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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