KEGG   Pseudomonas chlororaphis PA23: EY04_31965
Entry
EY04_31965        CDS       T03201                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pch  Pseudomonas chlororaphis PA23
Pathway
pch00260  Glycine, serine and threonine metabolism
pch00460  Cyanoamino acid metabolism
pch00630  Glyoxylate and dicarboxylate metabolism
pch00670  One carbon pool by folate
pch00680  Methane metabolism
pch01100  Metabolic pathways
pch01110  Biosynthesis of secondary metabolites
pch01120  Microbial metabolism in diverse environments
pch01200  Carbon metabolism
pch01230  Biosynthesis of amino acids
pch01240  Biosynthesis of cofactors
Module
pch_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pch00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    EY04_31965 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    EY04_31965 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    EY04_31965 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    EY04_31965 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    EY04_31965 (glyA)
Enzymes [BR:pch01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     EY04_31965 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Cys_Met_Meta_PP DegT_DnrJ_EryC1 Beta_elim_lyase OKR_DC_1
Other DBs
NCBI-ProteinID: AIC23372
Position
6993431..6994684
AA seq 417 aa
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIENAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVELAGWICDILDHLGDADVEANVARQVSALCADFPVYR
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagcaagcaagaccaaatccagggttatgacgatgcactgctggcggccatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtcggagaactacaccagc
aagcgcgtgatgcaagcgcaaggcagtggcctgaccaacaagtacgccgaaggttatccg
ggcaagcgctactacggtggctgcgagcacgtggacaaggtcgaggccctggccatcgag
cgcgccaagcaactgttcggcgctgactacgccaacgtccagccgcactccggttcctcg
gccaacagcgccgtatacctggccctgctgcaagccggcgacaccatcctgggcatgagc
ctggcccatggcggccacctgacccacggcgccaaggtgtcatcctcgggcaagctgtac
aacgccgtgcagtacggcatcgacaccaacactgggctgatcgactacgacgaagtcgag
cgcctggccgtcgagcacaagccgaagatgatcgtcgccggcttctcggcctactccaag
accctcgacttcccacgtttccgtcagatcgcggacaaggtcggcgcctatctctttgtc
gacatggcccacgtcgccggtctggtcgccgctggcctgtacccgaacccgctgccttac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatc
ctggccaaggccaacgaagaaatcgagaagaagctcaacgccgcggtattccctggcgcc
cagggcggcccgctgatgcacgtgatcgccggcaaggcggtgtgcttcaaggaagcgctg
gagcctggcttcaaggcctaccagcagcaagtgatcgagaacgcccaggccatggccggc
gtatttatcaaacgcggctacgatgtagtgtccggcggcaccgacaaccacctgttcctg
gtcagcctgatccgtcagggcctcaccggcaaggatgcggacgccgccctggggcgcgcc
cacatcaccgtgaacaagaacgctgtcccgaacgatccacagtcgccgttcgtgacctcc
ggcctgcgtatcggcaccccggcggtgaccacccgcggcttcaaggttacccagtgcgtg
gagctggccggctggatctgcgacatcctcgaccacctcggcgacgccgatgtcgaggcc
aatgtcgctcgtcaggtgtcggccctgtgcgcggacttcccggtttatcgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (37)   

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