KEGG   Pseudomonas cichorii: PCH70_16420
Entry
PCH70_16420       CDS       T03002                                 
Name
(GenBank) DNA polymerase III subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
pci  Pseudomonas cichorii
Pathway
pci03030  DNA replication
pci03430  Mismatch repair
pci03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PCH70_16420
   03430 Mismatch repair
    PCH70_16420
   03440 Homologous recombination
    PCH70_16420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pci03032]
    PCH70_16420
   03400 DNA repair and recombination proteins [BR:pci03400]
    PCH70_16420
Enzymes [BR:pci01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PCH70_16420
DNA replication proteins [BR:pci03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PCH70_16420
DNA repair and recombination proteins [BR:pci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PCH70_16420
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_22 AAA_5 ResIII AAA_14 AAA_16 TIP49 AAA_30 AAA_19 PIF1 AAA_18 AAA_2 TsaE nSTAND3 AAA_7 SKI Rad17 DUF3646 AAA_24 Herpes_Helicase zf-CXXC
Other DBs
NCBI-ProteinID: AHF66795
Position
1852372..1854495
AA seq 707 aa
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCQEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLSHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVFDVLTALLEGDARGLLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
AESADAPRQPLKPVGINQAAVDSRPPVAVATAVAPVAPVTPAAAPAPVVAPAPVVEKPAP
EPVQPPVQEAAPVEEIDLPWIESKAPVAEPVPEPVAEPEPEPVLETVAEQPELTPMPTPE
PASPVPDAPQVQQPEPVAEQQVTPGMLEAIPDSAYMSAPMDRDDEPPADDDYVEPDIDID
PASYSYLDELAHESVTEAEASEPEPEPAAMPATGLALQWLEMFPQLPISGMTGSIAANCT
LIKAEGDNWLLHLDPAHSALFNSTQQRRLNDALNQFHGRTINLSIELIKPEQETPAQAAS
RLRAERQRQAEASIHADPFIQQMLQQFGAVIREDTIKPVDAPVAQAH
NT seq 2124 nt   +upstreamnt  +downstreamnt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctgaaggccctgatcaatgcgctggacagccagcggctgcaccatgcc
tatctgttcaccggcacccgtggcgtcggcaagacgaccattgcgcggatcatcgccaag
tgcctgaactgtgaaaccggcattacttcaacgccttgcggtacctgttcggtctgtcag
gaaatcgacgagggccgttttgtcgacctgatcgagatcgacgccgccagccggaccaag
gtcgaggacacccgcgagttgctggataacgtccagtacgcaccgagccgcgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagccactcgttcaatgcgttgctc
aagaccctcgaagagccaccgccttacgtcaagttcatcctggcgaccaccgacccgcaa
aagctgccagccacgattctgtcgcgctgcctgcagttctcgctgaagaacatgaccccc
gagcgtgtggtcgaacacttgagccatgtgctgggtgtcgagaatgtgccgttcgaggac
gacgcactctggctgttgggccgtgcggctgatggttcgatgcgtgacgccatgagcctg
accgatcaggccattgctttcggcgaaggcaaggtcatggccgccgatgtgcgtgccatg
ctgggcacactggaccatggtcaggtgttcgatgtgctgacggccttgctggaaggcgat
gcacgcgggctgctggaggccgtgcgtcacttggccgagcaagggcctgactggaatggc
gtgctgtcggagattctcaacgtcctgcaccgtgtggcaattgcccaggcgctgcccgag
ggtgtcgacaacggtcacggtgaccgtgatcgcgtactggctctggcacaggcgctgcct
gccgaagatgtacagttttattaccagatgggcctgattggacgtcgcgatcttcctctg
gcgccggacccgcgcggcggctttgaaatggtgctgctgcgcatgctggccttccgtcct
gccgagagcgccgatgcgccgagacagccgctaaagccagtggggatcaaccaggccgca
gttgattcccgacctccggtggcagttgccactgccgttgccccggttgctcccgtcacg
cccgctgctgcgcccgcaccggttgtcgcgcctgcgcctgtcgttgaaaagcctgcgccc
gagcccgtgcagccgcctgttcaagaggctgcgccggtcgaagaaatcgatctgccatgg
attgagtccaaggcccctgttgccgagccggtgcctgagcctgtcgctgagccagagcca
gaacccgtgcttgaaaccgtggccgagcagcccgagctgacgccaatgcccacgcccgag
ccggccagcccggtgccggacgcgccgcaggtccagcagcccgagccggtggctgagcag
caggtgacaccgggcatgcttgaggccattccggattcggcctatatgtcggcccccatg
gatcgcgacgacgagccgcctgcggatgacgactatgtagagccggatatcgacatcgat
cctgcttcctatagctatctcgatgagctggcccacgaaagtgtcaccgaagccgaggca
tcggagcccgagccagaacccgctgcgatgccggccacgggccttgcgctgcaatggctg
gaaatgttcccgcagttgcccatttcgggcatgacaggcagcatcgccgccaactgcaca
ctgatcaaggccgaaggcgataactggctgctgcacctggaccctgcccacagcgccttg
ttcaactcgactcagcagcgtcgcctcaatgatgcgttgaaccagttccatggccgcacg
atcaatttgagtatcgagctgatcaagcccgagcaggaaacccctgcccaggcggcgtct
cgcttgcgtgccgagcgtcagcgtcaggccgaggcttcgattcatgccgatccgttcatc
cagcagatgttgcaacagtttggcgcagtgattcgggaggatacgatcaaacccgtggac
gctcccgtagcgcaggctcattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (25)   
   Pfam (25)   
All databases (37)   

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