KEGG   Pseudomonas cichorii: PCH70_21180
Entry
PCH70_21180       CDS       T03002                                 
Name
(GenBank) type VI secretion protein, VC_A0114 family
  KO
K11893  type VI secretion system protein ImpJ
Organism
pci  Pseudomonas cichorii
Pathway
pci02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pci00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PCH70_21180
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pci02044]
    PCH70_21180
Secretion system [BR:pci02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PCH70_21180
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: AHF67271
Position
2380156..2381490
AA seq 444 aa
MSVLPDAVCWHEGMQLLPQHFQLQGLRSEALAAHLAQASNPWYWGVSNLDLDPSALFAGQ
VRILALDATLPDGMPLSIRAGSGPMVELDINEAAAASATSTVMVYLAISPLWRAGQLLPL
KGRLQSVLGDSLPDLASGENPETITVWRPNPRLVTEANRADSICLPLLHVRKEGGGFVQL
PYVAPTPLILPESLLGRRVAELCARTREKCMFLAGRLRQAQQAGNQDDAEEIRLQSAALW
ARLPEVEGALSSRVATAQGLHGLLLGMTGSWSVLDPVSGVPAYAPLDFLDLYRGYDQVLT
WLERTLEQVRVGFRSVPFEQADHVFSITLPEQKPRQRLVVGLRMPAGAAAQAATDWLGRA
IIASGPHIPVLARQRMSGLSHQAMSRQEQVAYSMGDDTRLFVIQASGEWFDPTQPLHIVS
SISGGAVSPWQVVLFIDKTTNESA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagcgtgctacctgatgcagtctgctggcacgaaggcatgcaattgctgccccagcat
tttcagttgcaaggcttgcggtccgaagcgctggcagcccatctggcccaggcatcgaac
ccttggtactggggtgtttcgaatcttgatctggatccttcggccctgtttgccgggcag
gttcgcatcctggcgctggacgccaccttgcctgatggcatgcccctgagcattcgtgcc
ggatccgggccgatggtggaacttgatatcaatgaggcggctgcagcatccgccacttcg
accgtgatggtctatctggcgatcagccccttgtggcgcgccggtcagttgttgccgctc
aagggccgcctgcaatcggtgctcggcgattcgctgccggatctggccagtggcgagaac
ccggaaaccatcactgtctggcgacccaatccacggttggtcaccgaggccaacagggcc
gactccatctgcctgcctctgctgcatgtgcgtaaagaaggtggcggtttcgttcaattg
ccctatgtcgcgccgacaccgttgatcctgcctgagtccttgttggggcgtcgcgtggcc
gagttgtgcgcccgcacccgtgaaaaatgcatgtttctggccggacgtttgcgtcaggcc
cagcaggcgggtaatcaggacgatgccgaggaaatccgtctgcaatccgctgcgctctgg
gccagattgcccgaggtggaaggtgccttgagcagccgggtcgccacggcccaggggctg
catgggctgttgctcggaatgaccggtagctggtcggtactggacccggtttcgggtgtg
cctgcttatgcgccgctggactttctcgatctgtatcgcggctacgatcaggtgctgacc
tggctggagcgcactctggagcaggtgcgagtcggctttcgcagcgtgcctttcgagcag
gccgaccatgtcttttccattacgctgcccgagcagaaacctcgccaaagactggtggtc
ggcttgcgcatgccggccggtgcggctgcgcaggcagcaaccgactggctgggcagggca
atcatcgcttccgggccgcacattccggtgctggcacgccagcgcatgagcggtttgtcc
catcaggcgatgagtcgtcaggaacaggttgcctacagcatgggcgatgacacgcggctg
tttgtcatccaggccagtggcgagtggttcgacccgacgcagccgttacacatcgtttca
tccatttcaggaggcgcggtcagcccctggcaagtcgttctgttcatcgacaaaaccacc
aacgaatccgcctga

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