KEGG   Pseudomonas cichorii: PCH70_23970
Entry
PCH70_23970       CDS       T03002                                 
Name
(GenBank) type VI secretion system effector, Hcp1 family
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pci  Pseudomonas cichorii
Pathway
pci02025  Biofilm formation - Pseudomonas aeruginosa
pci03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pci00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PCH70_23970
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PCH70_23970
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pci02044]
    PCH70_23970
Secretion system [BR:pci02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PCH70_23970
SSDB
Motif
Pfam: T6SS_HCP CHRDL_1_2_C
Other DBs
NCBI-ProteinID: AHF67550
Position
complement(2716956..2717471)
AA seq 171 aa
MATPVYMSIKGSRQGLITEKALTFESVGNTYKKEHEDQFMIQAVSHVITVPCDLQSSQPA
TTRIHKPLCITKIFDRASPMLQAALASNERLPLVEIHWYRIADGVLEHYYTTSLEDAVIV
EIKDYMLSSQDPANAHSSHLQDVHIAYSKITWTHLMAKSSGSDDLRFPIRA
NT seq 516 nt   +upstreamnt  +downstreamnt
atggccacacctgtttacatgtctataaaaggttccagacaaggcctgatcactgaaaag
gccttaacttttgaatcggttggaaacacttataagaaggagcatgaagatcagttcatg
atccaggctgtcagccatgtgatcaccgttccttgtgatttacagtcaagccagcctgcc
accacacgcattcacaaacccctctgcattaccaagatattcgacagagcttcaccgatg
ctgcaggcagcactggcctccaacgaacgcctgcctctggtcgaaatacactggtatcgc
attgcggatggcgtgctggagcactattacaccacctccctggaagacgccgtcattgtg
gaaatcaaagactacatgcttagcagccaggatccagccaacgcgcattccagccacttg
caagacgttcatatcgcctacagcaaaataacctggacccatctgatggccaagagctca
gggtctgacgacttgcgctttccaataagagcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system