KEGG   Candidatus Pantoea carbekii US: BMSBPS_0146
Entry
BMSBPS_0146       CDS       T03853                                 
Name
(GenBank) DNA polymerase III chi subunit HolC
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
pck  Candidatus Pantoea carbekii US
Pathway
pck03030  DNA replication
pck03430  Mismatch repair
pck03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pck00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BMSBPS_0146
   03430 Mismatch repair
    BMSBPS_0146
   03440 Homologous recombination
    BMSBPS_0146
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pck03032]
    BMSBPS_0146
   03400 DNA repair and recombination proteins [BR:pck03400]
    BMSBPS_0146
Enzymes [BR:pck01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BMSBPS_0146
DNA replication proteins [BR:pck03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BMSBPS_0146
DNA repair and recombination proteins [BR:pck03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BMSBPS_0146
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: AKC31972
UniProt: A0A7U5D0M5
Position
205969..206415
AA seq 148 aa
MKKATFYILNSNNIQNGLTAIETLVCNLVNLFWRNKKRILISCENKKQAYCLDEALWLYP
ANTFIPHNLVGEKINYSAPIEIIWPQHSHNYSKQDILINLLPQFTNLVTVFDEVIDFVPY
EKKILKELARQRYKTYRGLGFQLSAVYQ
NT seq 447 nt   +upstreamnt  +downstreamnt
atgaaaaaagctactttttatatactaaattctaacaatattcaaaatggtttaactgct
atagaaacactagtgtgtaacttggttaacttattttggcgtaataaaaaacgtattcta
atttcttgtgaaaataaaaaacaggcttattgtttagatgaagcattatggctatatcct
gctaatacttttataccacataatcttgtaggtgaaaaaattaattatagtgcaccaatt
gagataatatggccacaacacagccataattattcaaagcaagacattttaattaattta
ttaccacaatttacaaatctagtgacagtatttgatgaagtgatagattttgtgccctat
gaaaaaaaaattctaaaagaattagcacgtcaacgttataaaacctatcgtggtttaggt
tttcaattaagtgcagtttaccaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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