KEGG   Pedobacter cryoconitis: AY601_0028
Entry
AY601_0028        CDS       T04341                                 
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
pcm  Pedobacter cryoconitis
Pathway
pcm00470  D-Amino acid metabolism
pcm00550  Peptidoglycan biosynthesis
pcm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AY601_0028
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AY601_0028
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pcm01011]
    AY601_0028
Enzymes [BR:pcm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     AY601_0028
Peptidoglycan biosynthesis and degradation proteins [BR:pcm01011]
 Precursor biosynthesis
  Amino acid ligase
   AY601_0028
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C MurD_N MurD-like_N AlaDh_PNT_C Pyr_redox_3 MutL HI0933_like FAD_oxidored Pyr_redox_2 NAD_binding_8 DAO
Other DBs
NCBI-ProteinID: AMP97001
UniProt: A0A127V6R9
Position
36443..37786
AA seq 447 aa
MEKQRIVILGAGESGVGAAILAQKQGFDVFVSDFGAIAGRYKETLVELNIAFEEKQHTVA
SIINANEVIKSPGIADSVSIIKELKKKNIPVISEIEFAKRYTTAKTICITGSNGKTTTTM
LTYHILKKAGLNVGLAGNIGHSFAAQVATENFDWYVLEISSFMLDDMYDFRADIAVLLNI
TPDHLDRYDYKMTNYAASKMRIVQNQRPEDHFIFCADDEETLKALKSTKVNSQKCPFSIR
KKVEGGAYLEGNNIHININPKDHLTMSISELALQGKHNIYNSMASGIVAKVLEIRNVTIR
ESMGDIKNIEHRLEHVAKISGVDYINDSKATNVNSTWYALESVNTDVILIMGGVDKGNDY
DMLKDLVKQKVKAIVCLGKNNKRIHEAFEDDVEIIVNTFSANEAVQVAYHLATKGNTVLL
SPACASFDLFKNYEDRGNQFKMAVKEL
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggaaaagcaaaggatcgttatactcggagctggtgaaagcggtgtaggtgctgcaatt
cttgcgcagaagcagggctttgatgtttttgtttcagatttcggggcaattgccggccgt
tataaagaaacattggtggaactgaatattgcatttgaagaaaaacagcatactgttgct
tcgatcatcaatgcaaatgaagtaattaagagtcccggaattgcagattctgtgtctatt
atcaaagaactgaaaaagaaaaacatcccggtgatctcagagattgagtttgctaaaaga
tacacgactgcaaaaactatttgtattaccgggtcaaatggcaaaacaacaacaacgatg
ctgacttaccatatcctaaaaaaagcaggcttaaatgtaggtcttgctggtaatatagga
catagttttgcagcacaggtagctacagaaaatttcgattggtatgtactggaaatatcg
agctttatgctggacgatatgtatgatttcagagctgatatcgctgtacttttaaacatt
acgcctgaccatctggacaggtacgattacaaaatgacaaattacgcagcttcaaaaatg
cgtatcgtacagaatcagagacctgaagatcattttatcttttgtgccgatgatgaagaa
accctgaaggctttgaaaagcacgaaggtaaattcacagaaatgcccattctctattcgt
aaaaaagtagaaggcggagcttatctggaaggcaacaatattcatatcaatataaatcca
aaagaccatttaaccatgtcaatttcagagttagctttacaaggcaagcacaatatctac
aactctatggcttcgggcatagtcgctaaagtgttggaaatccgcaatgtgaccatcaga
gagagtatgggagatattaaaaatattgaacaccggttggagcatgtcgccaagatttcg
ggtgtggattatatcaacgattcaaaagcaactaacgttaactctacctggtatgcgctg
gaaagtgtaaatactgacgtaatcctgattatgggtggtgtggataagggcaatgattat
gatatgctgaaagatctggttaagcaaaaagtgaaagctattgtttgcctgggtaaaaat
aataaacgtattcatgaagcttttgaggatgatgtggaaattattgtcaatacgttctct
gcaaatgaagccgtacaggtagcttatcacctggcaacaaaaggaaataccgtattgttg
tcaccagcttgtgcaagttttgatttgtttaagaattatgaagaccgtggaaaccaattc
aaaatggctgtaaaagaattataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (31)   

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