KEGG   Pedobacter cryoconitis: AY601_3910
Entry
AY601_3910        CDS       T04341                                 
Name
(GenBank) Succinate dehydrogenase
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
pcm  Pedobacter cryoconitis
Pathway
pcm00020  Citrate cycle (TCA cycle)
pcm00190  Oxidative phosphorylation
pcm00650  Butanoate metabolism
pcm01100  Metabolic pathways
pcm01110  Biosynthesis of secondary metabolites
pcm01120  Microbial metabolism in diverse environments
pcm01200  Carbon metabolism
Module
pcm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pcm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    AY601_3910
   00650 Butanoate metabolism
    AY601_3910
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    AY601_3910
Enzymes [BR:pcm01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     AY601_3910
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 DAO GIDA NAD_binding_8 Pyr_redox AlaDh_PNT_C PALP HI0933_like FAD_binding_3 FAD_oxidored 3HCDH_N
Other DBs
NCBI-ProteinID: AMQ00766
UniProt: A0A127VHG1
Position
complement(4618431..4620410)
AA seq 659 aa
MADFNANIPEGELTVKWTKLRSSMPLVNPANKRSIEIIVVGSGLAGASAAATLAEMGYKV
KCFCFQDSPRRAHSIAAQGGINAAKNYQNDGDSVYRLFYDTIKGGDYRSREANVHRLAEV
SANIIDQCVAQGVPLAREYGGLLDNRSFGGTQVQRTFYAAGQTGQQLLLGAYSALERQIG
MGKVEMFTRHEMLEVVKIEGKARGIIARNLITGELERHFGHAVLLGTGGYGNVFYLSTNA
MGSNVTAAWKAHKKGAFFGNPCFTQIHPTCIPVSGDHQSKLTLMSESLRNDGRIWVSKKK
DDQRIATDIPEDERDYYLERRYPAFGNLVPRDVASRAAKERCDAGYGVGISKLAVYLDFK
ANTERYGRIEASVHNIHNPDKETCMRLGREVIKEKYGNLFDMYKQITGEDPYELPMRIYP
AVHYTMGGLWVDYNLMTTVPGLYALGEANFSDHGANRLGASALMQGLADGYFVIPYTIGS
YISKELATKAISLDHPAFVEAEASVKAILDKFISIKGTKSVDFFHKKLGKIMWEKCGMAR
NAKGLSEAIVEIQQLRKDFWSDVRVPGSTDEFNPELEKAGRVADFIELGELMCMDALNRN
ESCGGHFREEYQTEEGEALRDDENYAYVSAWEYKDDVKFELHKEELKFENIKIAQRSYK
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggcagattttaatgcaaatataccggaaggggaactgaccgtgaaatggactaaactg
aggtcttcaatgcctctggttaacccggcgaataaaagaagtatagaaattatagtagta
ggttcagggcttgcaggtgcttcggcagcagcaacccttgctgaaatgggatataaagtt
aaatgtttttgtttccaggattcaccaagaagagcgcactctattgcagctcagggtggt
atcaatgcagcaaaaaattatcagaatgatggtgacagtgtttaccgtttattctacgat
acgattaaaggtggtgattaccgctcccgtgaagctaacgttcaccgtttagctgaggta
agtgcgaatatcattgaccagtgtgtggctcagggagttcctctggcgagagagtatggt
ggattactggataaccgttcattcggtggtactcaggttcagcgtacgttttatgctgcc
ggacaaactggtcagcaattgctattaggtgcttacagtgctttagagcgtcagattggt
atgggtaaagtagagatgtttacccgtcatgaaatgcttgaagttgttaaaattgaaggt
aaagcacgtggtattattgcccgtaacttaattacaggtgaactggaacgtcacttcggt
catgcggtattgttaggaacaggtggttacggaaacgtattctatctttctaccaatgcg
atgggaagtaacgtaactgcagcctggaaagcacacaaaaaaggagctttctttggtaat
ccttgttttacccagatccaccctacttgtatcccggtatcaggagatcaccaatcgaaa
ttaaccctgatgtctgagtcattacgtaatgacggacgtatctgggtttctaagaaaaaa
gacgatcagcgtatcgcaacagatattcctgaagacgaaagagattattatttagagcgt
cgttatcctgctttcggtaaccttgttccacgtgatgtggcttcaagagctgccaaagag
cgttgtgacgctggttatggtgttggtatttctaaactggctgtatacctggatttcaaa
gcaaatacagagcgttacggacgtattgaagcttcagtacacaatatccacaatccggat
aaagaaacttgcatgcgcttaggccgtgaggtgatcaaagagaaatacggaaacttgttt
gacatgtacaaacagattactggtgaagatccttatgaattaccaatgcgtatttatcct
gcagttcactatacaatgggcgggttatgggtagattataacctgatgactactgtgccg
ggcttatatgctttaggtgaggctaacttctccgaccatggtgctaaccgcttaggtgct
tctgctttgatgcagggacttgcggatggttactttgtaatcccttatactatcggttct
tatatttctaaagagttggctactaaagcaatttctctggatcatcctgcatttgtggag
gcagaagcgagtgttaaagctatccttgataaattcatttcaattaaaggaacaaaatct
gtagacttcttccacaagaaattaggtaagatcatgtgggaaaaatgtggaatggcgcgt
aatgcaaaaggactttctgaagcgattgtagaaatacaacaattgcgtaaagatttctgg
tctgatgtacgtgttcctggttcaacagatgaattcaatcctgagttagaaaaagctggc
cgtgtagctgactttatcgaattgggtgagctgatgtgtatggatgcattgaacagaaat
gaatcatgcggaggtcacttcagagaagaatatcagactgaagaaggtgaagctttaagg
gatgatgaaaactatgcttacgtatctgcatgggaatacaaggatgatgttaagtttgaa
cttcacaaagaggagttgaaattcgagaacatcaaaattgcacaaagaagttataaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (39)   

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