KEGG   Phanerochaete carnosa: PHACADRAFT_84000
Entry
PHACADRAFT_84000  CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K12613  mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
Organism
pco  Phanerochaete carnosa
Pathway
pco03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PHACADRAFT_84000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pco03019]
    PHACADRAFT_84000
Enzymes [BR:pco01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.62  5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
     PHACADRAFT_84000
Messenger RNA biogenesis [BR:pco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PHACADRAFT_84000
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     PHACADRAFT_84000
SSDB
Motif
Pfam: DCP2 NUDIX NUDIX_4
Other DBs
NCBI-GeneID: 18920426
NCBI-ProteinID: XP_007390494
JGI: Phaca1_84000
UniProt: K5WNN0
Position
Unknown
AA seq 221 aa
VTQKYHSRFILNLPEAELASLERVCFQVEQAHWYYEDFVREQDPSLPTMTLKKFSHSLFH
VCPLLSHWGDDHEQTFQNFMAYKTRVPVCGAIMLNETWDKCLLVKGWKSTSAWSFPKGKI
NEQEPRHRCAVREVLEETGYDLSEQINPADVVELSIRDQSLSLYIVSNVPEEYPFATRTR
KEISKIAWFKLQDLPTWKRNKSVPGKFYLITPFIGCVRYLL
NT seq 666 nt   +upstreamnt  +downstreamnt
gttactcaaaaataccacagtcgattcatcctaaaccttcccgaggcagaactggcttca
ctagagcgggtatgtttccaggtggaacaggcacattggtactacgaagatttcgtccga
gaacaagatccgtccctccctacgatgactctcaagaaattctcacacagtctcttccac
gtttgccctcttctcagccactggggtgacgaccatgagcagacatttcaaaacttcatg
gcatataagacccgagttcctgtatgtggtgcgataatgctaaatgagacatgggacaag
tgtctgctcgtgaagggttggaaatctacctccgcatggagcttcccgaaaggcaagatc
aatgaacaagaaccgaggcatcgatgtgcagtgcgcgaagtgttggaagagacgggctat
gacttaagcgaacagattaaccctgcggacgttgtagagctgtcgattcgagaccaatca
ttgtcactgtacatcgtgtccaacgtacccgaagagtacccctttgccactcgaacacgc
aaggagatcagtaaaatcgcttggttcaagctccaagatctcccaacgtggaagcgtaac
aagtctgttcctgggaagttctatctcatcacgcctttcatcgggtgcgtccgctatctc
ctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system