KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_00820
Entry
JM49_00820        CDS       T03338                                 
Name
(GenBank) type VI secretion protein ImpA
  KO
K11910  type VI secretion system protein VasJ
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_00820
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JM49_00820
SSDB
Motif
Pfam: T6SS_VasJ ImpA_N
Other DBs
NCBI-ProteinID: AIS10254
Position
178463..180019
AA seq 518 aa
MSYSSKLSAHYLELAKASVSKESFAGEDVRFSSEYEALESELGKAQSMHESGQIDWLKIL
ENSEALLRTQSKDLRVAAWLTWALYQRESFPGLLAGLGLLQHLCEQHWAQIHPAKLRTRA
AAIGWLVPRLEQVLGENIAIKEQLPLFRRLVEHLEGLDAVLTEHLGDNAPLLLPICRRLS
TMVQRAADNQPEPGAVGAVVAQVKQAATQLFTPGAPIDNEKEAQKALRALQENARPLSAW
WLKQKATDVRALRLNRTMLWLPIDAVPERNAEQITALRGLPADKLKTYQERFANGQYADL
LVELEASLARAPFWFDGQRMVWECLQGLNADQAMREVEFHFALLLQRLPGVIELRFHDGA
PFADPATRSWISAHVMPHLQSASAPRKVEATTSQPAWEEALEEVLPILRKDGLKAAVQVL
KQGLQNAHGGRVRFFWQFSLARLCFMAKKYELAKTQLETLDQELLSSGLHAWEPDLALEV
LHLLHSCCELLPQNHAVRERKEEIYRRLCHLDLEVVLE
NT seq 1557 nt   +upstreamnt  +downstreamnt
atgtcctactcaagtaaactttctgcccattacctcgaactcgccaaggcctctgtttcc
aaagagagttttgcgggcgaggacgttcgcttctccagcgaatacgaggcattggaaagt
gagctgggcaaagcccaatccatgcacgaaagcggtcagatcgactggctgaaaatcctc
gaaaacagtgaagcgctgctgcgtacccagtccaaggatctgcgggtagccgcctggctc
acctgggcgctgtatcagcgtgaatccttccctggcctgctggccggccttggtcttctg
cagcacctgtgcgaacagcattgggcgcagatccaccccgccaaactgcgtacccgggct
gccgccatcggctggctggtgccgcgtctcgagcaggtgctgggcgaaaacatcgcgatc
aaggagcagctgccgctgttccgccgcctggtggaacacctggaagggctcgatgccgtg
ctcaccgagcatctgggcgacaacgcgcccttgctgctgccgatctgccggcggctgtcg
accatggtccagcgcgccgccgacaaccagccggaacccggcgccgtgggcgcggtggtg
gcccaggtcaagcaggccgcgacccagctgttcacgcccggcgcgcccatcgacaacgag
aaggaagcgcagaaggccctgcgcgcgttacaggaaaacgcccgcccgctgagcgcctgg
tggctcaagcagaaggccaccgatgtgcgcgccctgcgcctgaaccgcaccatgctgtgg
ttgcccatcgatgccgtcccggagcgcaatgccgagcagatcaccgcgttgcgcgggttg
ccggccgacaagctgaagacctatcaggaacgttttgccaatgggcaatacgccgacctg
ctggtggagctcgaagccagcctggccagggcgccgttctggttcgatggccagcgcatg
gtctgggaatgcctgcagggactgaacgccgaccaggcgatgcgcgaagtggagtttcac
ttcgcactcctgttgcagcgtctgccgggggtgatcgagctgcgtttccatgacggcgcg
ccttttgccgatccggccacccgcagctggatcagcgctcacgtcatgccccatctgcaa
agcgccagcgcgccgcgcaaggtcgaagcgaccaccagccagccggcctgggaagaagcc
ctcgaagaggtcttgccgatcctgcgcaaggatggcctcaaggccgccgtgcaggtcctc
aagcaaggcctgcagaacgcccacggcggacgggtgcggttcttctggcagttcagcctg
gcgcggctgtgcttcatggccaagaaatacgagctggccaagacccagctcgaaaccctc
gatcaagaattactgagctcgggcctgcatgcctgggagccggatcttgcgttggaagtg
ctgcacctcctgcatagctgctgtgagttgttgccgcagaaccacgcagtgcgagaacgc
aaggaagagatttatcgcaggctgtgccacctcgacctcgaagtggtactcgaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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