KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_00855
Entry
JM49_00855        CDS       T03338                                 
Name
(GenBank) type VI secretion protein
  KO
K11896  type VI secretion system protein ImpG
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_00855
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JM49_00855
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: AIS10261
Position
185029..186816
AA seq 595 aa
MSFNHYYQSELTALRQLGRRFAERSPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLD
DELPELSHSLMHLLWPNYMRPLPAFSILQFDPLKHSGPALRVERDTPVESKPIDDVRCRF
RTCYPIEVLPLDLTALNYSVKGDGALLSLRLEMSCDGHLGELNLSRLRLHLAGERYISQM
LYLSLLRNLEGIELVPLGMDGKPFPGVGGNAMSFKMPGNRVQPVGFAEEEALIPYPLNTF
RGYRYLQEYFAFQDKFLFVDLNGLDLLKSLPEDTLKQLHGLEVRFDIRKSGIQRLRPTLD
NVKLYCTPIANLFKHDALPIRLDGKQDEYLLLPAEYDLENCGVFSVETVTGWKPGGLGYQ
EYVPFESFEHDPSFDVPQSRPHYSIRQRSSLLHDGLDTYLSFGIRHTEAHETLSIELTCT
NQNLPRRLKLGEINQACEETPEFLSFRNITPATSSYAPPLNRDFLWKLISNMSLNYLSLA
NVDALKVILETYDLPRYYDQHLEKVSKRLLGGLKSIRHEHVDRLHRGLPLRGLRTELTID
PEGYIGEGDMFVFASVLNEFFALYASLNSYHELRVKSTQGEVYQWTPRMGLQPLL
NT seq 1788 nt   +upstreamnt  +downstreamnt
gtgtcctttaaccactactaccaaagcgaactcaccgcgctgcgccagctgggtcgccgt
ttcgccgagcgtagtccggcgctggcaccgtttctcgggcaggccgggcgggacccggat
gtggagcgcctgctcgaaggtttcgcgttcctcaccggtcgcttgcggcagaagctcgat
gacgagctgccggagctgagccattcgctgatgcacctgctgtggccgaactacatgcgg
ccgttgccggcgttcagcattttgcagttcgacccgctgaagcactccgggccggccctg
cgcgtggagcgtgatacgccggtggagagcaagcccatcgatgacgtgcgctgccgcttc
cgtacctgctacccgatcgaagtcctgccgctggacctgacggcgctgaactactcggtt
aaaggcgacggtgcactgctcagcctgcgcctggagatgagctgcgacggccatctcggc
gagctgaacctgagccgcctgcgcctgcacctggcgggcgagcgctacatcagccagatg
ctctacctgagcctgctgcgcaaccttgaaggcatcgagctggtgccgctgggcatggac
ggcaagccgttcccgggtgtcggcggcaatgccatgtcgttcaagatgccgggcaaccgt
gtgcagccggtgggctttgccgaagaagaggcgttgattccgtatccgctcaacaccttc
cgcggttatcgctatctgcaggagtattttgccttccaggacaagttcctgttcgtcgac
ctgaacggcctggacctgctcaagtcgctgccggaggacaccctcaagcagttgcacggc
cttgaggtgcgcttcgacattcgcaagagcggcatccagcgcctgcggccgaccctggac
aacgtgaagctgtactgcacgccgatcgccaacctgttcaagcacgacgcgctgccgatc
cgcctcgatggcaagcaggacgagtacctgctgctgccggccgagtacgacctggaaaac
tgcggcgtgttctcggtggaaaccgtcaccggctggaagcccggcggcctgggttaccag
gaatatgtgccgttcgaatccttcgagcacgacccgagtttcgacgtcccgcaaagccgc
ccgcactacagcatccgccagcgctcctcgttgctgcacgacggcctggacacttacctg
agcttcggtatccgtcacaccgaggcccacgaaaccctgtccatcgagctgacctgcacc
aaccagaacctgccgcgccggctcaagctcggcgagatcaaccaggcgtgcgaggaaacc
ccggagttcctcagcttccgcaacatcaccccggccacttcgagctacgcgccaccgctg
aatcgcgacttcctgtggaagctgatcagcaacatgtcgctcaactatctgtcgctggcc
aacgtcgatgcgctcaaggtgattctcgaaacctacgacttgccgcgctactacgaccag
cacctggaaaaggtcagcaagcgcctgctgggcgggctcaagtcgatccgccacgagcat
gtcgaccggctgcaccggggcctgccgctgcgcggtctgcgcaccgagctgaccatcgat
ccggaaggttatatcggtgaaggcgacatgttcgtcttcgcctcggttctcaacgagttt
ttcgctctttacgccagtctcaactcgtaccacgagctgcgggtaaaaagtacacaggga
gaggtgtaccaatggacaccacgtatgggtctacagcccctgctttaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (7)   

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