KEGG   Pseudomonas citronellolis: PcP3B5_50170
Entry
PcP3B5_50170      CDS       T04637                                 
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
pcq  Pseudomonas citronellolis
Pathway
pcq03030  DNA replication
pcq03430  Mismatch repair
pcq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PcP3B5_50170 (holC)
   03430 Mismatch repair
    PcP3B5_50170 (holC)
   03440 Homologous recombination
    PcP3B5_50170 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcq03032]
    PcP3B5_50170 (holC)
   03400 DNA repair and recombination proteins [BR:pcq03400]
    PcP3B5_50170 (holC)
Enzymes [BR:pcq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PcP3B5_50170 (holC)
DNA replication proteins [BR:pcq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PcP3B5_50170 (holC)
DNA repair and recombination proteins [BR:pcq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PcP3B5_50170 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: AMO78403
Position
5550314..5550742
AA seq 142 aa
MTRVDFYVIPSADPDARLTIACRLADKAWRQGMRVYLLCADEAQREALDARLWSFRKEAF
VPHNAAEEDAQAPVTLGLGGPPAGRRDLLINLTLAVPAFAGEFSRIAELVVEEPAIRQAA
RENFRFYREQGYPLQDHRLPRL
NT seq 429 nt   +upstreamnt  +downstreamnt
atgacgcgggtcgacttctacgtcatccccagcgccgatcccgacgcgcgcctgaccatc
gcctgccgcctggccgacaaggcctggcggcagggcatgcgggtgtacctgctgtgcgcc
gacgaagcccagcgcgaggccctggacgcgcgcctgtggagcttccgcaaggaagccttc
gtgccgcacaacgccgccgaggaagacgcccaggccccggtcaccctgggcctgggcggg
ccgccggcgggccgccgcgacctgctgatcaacctgacgctggcggtgccggccttcgcc
ggcgagttctcgcgcatcgccgaactggtggtggaggagccggccatccgccaagcggcg
cgggagaatttccgcttctaccgcgagcagggctatcctttgcaggaccatcgcctgccg
cgcctctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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