KEGG   Pseudomonas citronellolis: PcP3B5_52020
Entry
PcP3B5_52020      CDS       T04637                                 
Symbol
hcpA
Name
(GenBank) Major exported protein
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pcq  Pseudomonas citronellolis
Pathway
pcq02025  Biofilm formation - Pseudomonas aeruginosa
pcq03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcq00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PcP3B5_52020 (hcpA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PcP3B5_52020 (hcpA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcq02044]
    PcP3B5_52020 (hcpA)
Secretion system [BR:pcq02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PcP3B5_52020 (hcpA)
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AMO78586
Position
complement(5779261..5779779)
AA seq 172 aa
MPTPAYLSLEGTKQGLITAGTFTEDSVGNIFQEGHEDQVLVQAFNHQVIIPRDPQSGQPT
GQRVHKPLMITKVFDKSSPLIFNALTSGERLNKCRLEWYRTSSTGTQEHYFTIELEDAVI
VDVQSRMPNCQDPNMAHFTHLEDVYFTYRKIVWTHEVSGTSGSDDWRTPIAS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgccaacacccgcatacctgtccctcgaaggcaccaaacagggcctgatcaccgccggc
accttcaccgaggactcggtcggcaacatcttccaggaaggccacgaagaccaggtcctg
gtccaggcgttcaaccaccaggtcatcatcccgcgcgacccgcagtccggccagccgacc
ggccagcgcgtgcacaagccgctgatgatcaccaaggtcttcgacaagtcctcgccgctg
atcttcaacgccctgacctccggcgagcgcctgaacaagtgccgcctggagtggtaccgc
acctcctccaccggcacccaggagcactacttcaccatcgaactggaagacgcggtgatc
gtcgacgtgcagtcgcgcatgccgaactgccaggacccgaacatggcgcatttcacccac
ctggaagacgtctacttcacctaccgcaagatcgtctggacccatgaggtttccggcacc
tccggctccgacgactggcgcaccccgatcgcttcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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