KEGG   Psychrobacter cryohalolentis: Pcryo_0376Help
Entry
Pcryo_0376        CDS       T00350                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pcr  Psychrobacter cryohalolentis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pcr00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Pcryo_0376
Enzymes [BR:pcr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Pcryo_0376
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Pcryo_0376
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(455538..456461)
Genome map
AA seq 307 aa AA seqDB search
MPELPEVETTKTSLTPLLGQKVTNVQVFQPKLRWSMPDNLSDLIDYTLDSVERRAKYLIL
NFIPLADDGISSSVEPRNLQPKQLLIHLGMSGSLQQHHHTSDKRKHDHLIMSFIGADDTQ
TQLHYYDPRRFGSILWLEDYGDKLLNHLGPEPLSDDFTADYLYYLIQRSEQSIQTQSSKV
IKKQPIKRAIKSVIMEQQAVVGVGNIYATESLYLSGIHPATPANKISYDQIVILVAHIKT
ILQKAIKLGGSTLRDFTVADGQTGYFQQTLNVYGRQGETCPHCDSVLENIKLNGRASVYC
PVCQPIN
NT seq 924 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttaccagaagtagaaacgacaaaaaccagtctgacgcctttattaggacaa
aaagtcaccaacgtacaagtctttcaaccaaagcttcgttggtcgatgcctgataattta
tcagatttgattgattatacattggacagcgttgagcgacgggcaaagtatttaatcctc
aattttataccgctagctgatgatggcatttcatcttctgttgaacctaggaatttacag
ccgaaacagcttctgattcatcttgggatgtcaggtagcttgcaacaacatcatcatact
agcgataagcgcaaacatgatcatttgatcatgagttttatcggcgctgacgacactcaa
actcagctacattattatgaccctagacgtttcggctctatcttatggcttgaggattac
ggggataaactactaaaccatttaggacctgagccactatcagatgattttacggcagac
tatttgtattatcttatccaacgtagcgaacagtccatccagactcaaagcagcaaagtg
attaaaaagcagcctatcaaacgagccatcaagtcagtcattatggagcagcaagctgtg
gtcggcgttggtaatatttatgccactgagagcttatacctctcaggcatccatcctgct
actccagcaaataagatatcatatgatcaaatagtaattttagtcgcccatatcaaaact
attttacagaaagctatcaagctaggtggttcaacactacgtgactttacggttgctgat
ggtcaaacaggttatttccagcaaaccttgaatgtctatggtagacaaggtgaaacttgt
ccgcactgtgattcagttttagagaatatcaagctcaatggacgtgccagtgtctactgc
cctgtttgtcagccaattaattag

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