KEGG T00934: PC1

Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1236

Entry

PC1_1236 CDS T00934

Definition

2-oxoglutarate dehydrogenase, E1 subunit (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

pct Pectobacterium carotovorum subsp. carotovorum PC1

Pathway

pct00020	Citrate cycle (TCA cycle)
pct00310	Lysine degradation
pct00380	Tryptophan metabolism
pct01100	Metabolic pathways
pct01110	Biosynthesis of secondary metabolites
pct01120	Microbial metabolism in diverse environments

Module

pct_M00009	Citrate cycle (TCA cycle, Krebs cycle)
pct_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pct00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:pct00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:pct00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh FAM110_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1442586..1445393

AA seq 935 aa
MQNGAMKAWLDSSYLAGANQSYIEQLYEDFLTDPDSIEHSWRSIFQQLPTSGVKPDQLHS
KTREYFRRLAKDASRFTSSVTDPDIDAKQVKVLQLINAFRFRGHQRANLDPIFLRPQEPV
AELDLDYHNLTQDDLQESFNVGSFAIGKDTMKLEDLYEALKRTYCGSIGAEYMHITSTEE
KRWIQQRIESVMGQPSFTIDEKRRFLKELTAAEGLERYLGAKYPGAKRFSLEGGDALVPM
LKELIRHAGANDTREVVLGMAHRGRLNVLINVLGKKSQDLFDEFAGKHKEHLGTGDVKYH
QGFSSEFETAGGLVHLALAFNPSHLEIVSPVVTGSVRARLDRLNSQSGPRVLPITIHGDA
AVSGQGVVQELLNMSTVRGYEVGGTLRIVINNRIGFTTSNPLDIRSTEYCTDIGKMVQAP
IFHVNADDPEAVAFVTRLALDFRNAFKRDVFIDLICYRRHGHNEADEPSATQPMMYQKIK
KHPTPRKVYADRLEQEKSITPEDATEMVNLYRDALDAGECVVEEWREMDMQSFTWTPYLN
HEWDEPYPHATEMKRLQELAKRISEVPEGIDVHPRVAKVYADRAEMAAGNKPFDWGGAET
LAYATLVDEGIPIRLSGEDSGRGTFFHRHAVVHNQKNGSSYTPLDHVHNGQGAFNVWDSV
LSEEAILAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCIPSTPAQVYHMLRRQALRGMRRPLVVMSP
KSLLRHPLAISSLEELANGSFQPAIGEIEELDPAAVKRVVLCSGKVYYDLLEQRRKNEQK
DVAIVRIEQLYPFPHQAVQAALESFAHVHDFVWCQEEPLNQGAWYCSQHHFREVIPFGAS
LRYAGRPASASPAVGYMSVHQKQQQDLVDDALNVD

NT seq 2808 nt +upstreamnt +downstreamnt
atgcagaacggcgcaatgaaggcctggctggattcctcctatttggcgggtgcgaatcag
tcctacatagagcaactctatgaagattttttaaccgatcctgactcgatcgaacatagc
tggcgctcgatcttccagcaattgcctacgagtggggtcaaaccggatcaactccattcc
aaaacgcgtgaatatttccgccgtctggcgaaagacgcttcgcgctttacctcatcagtc
accgatcccgatattgatgctaagcaggtcaaggtattgcagctgatcaatgcgttccgc
ttccgtggacatcagcgtgctaacctggacccgattttcctgcgcccccaagagccagtg
gcagaattggatctggattaccataacctgacgcaggatgacctacaggaatccttcaac
gtgggctcttttgccatcggcaaagataccatgaagctggaagacctgtatgaagcactg
aagcgcacctattgcggttctatcggtgcggaatacatgcacatcaccagcacggaagag
aagcgctggatccagcagcgtatcgaatcggtaatggggcaaccgtcatttacgatagac
gagaaacgccgtttcctgaaagagttaaccgcagccgaagggctggagcgttatctgggt
gccaaatatcccggcgctaagcgtttctcgctggaaggcggtgatgcgctggttccgatg
ttgaaagagctgattcgccatgcgggtgcaaacgatacgcgtgaagtcgtgttggggatg
gcgcaccgtggccgcctcaatgtgctaatcaacgtattgggcaaaaaatctcaggatctg
ttcgacgagttcgccggtaaacataaagaacatctgggtacgggtgacgttaaatatcat
cagggcttctcgtctgaatttgaaactgctggtggtcttgtgcacttggcgctggcgttc
aacccctcgcatctggagatcgtcagcccggttgtgacgggatcggttcgtgcgcgtctt
gaccgtcttaatagccagagtggtccgcgtgttctgccaatcaccattcacggcgatgcg
gcagtcagtggtcagggtgtggtgcaggaattgctgaatatgtcgacggtgcgtggctac
gaagtcggtggcacgctgcgtattgttatcaataaccgtatcggcttcaccacgtctaac
ccgctggatattcgctccaccgagtactgtaccgatatcggtaaaatggtgcaggcgcct
attttccacgttaacgcagacgatcccgaagcggtggcgtttgtgacgcgtctggcgctg
gatttccgtaatgccttcaaacgcgatgtgtttatcgatttgatttgttaccgccgtcac
ggtcataacgaagctgacgagccaagtgcaacgcagccgatgatgtaccagaagatcaaa
aaacaccctacgccgcgtaaggtgtatgccgatcgtctggagcaggaaaaatccatcacg
ccggaagatgccaccgaaatggtcaacctgtaccgcgatgcgctggatgcgggtgaatgt
gtggtggaagaatggcgtgaaatggacatgcagtcctttacctggacgccgtatttgaac
catgagtgggatgagccttatccgcacgcaacagaaatgaaacgcttgcaggaactggcg
aagcgtatcagtgaagtgccggaagggattgatgtgcatcctcgcgttgccaaagtctat
gctgaccgtgctgaaatggccgcaggcaacaagccatttgactggggcggagcggaaacg
ctggcctacgcgacgttggtcgatgagggtattccgattcgcctgtccggtgaggatagc
ggccgtggtacgttcttccatcgtcatgctgtcgtgcataaccagaaaaacggttccagc
tacacgccgctggatcatgtgcataacggacagggcgcgtttaacgtctgggactccgta
ttgtccgaagaagcgattctggcgtttgaatacgggtatgcgaccgcagaaccgcgcacg
ctgaccatctgggaagcgcagtttggtgacttcgccaacggtgcgcaggtggttatcgac
cagttcatcagctccggcgagcagaagtggggccggatgtgtggtctggtgatgctgctg
ccgcacggttacgaagggcagggccctgagcactcgtctgcgagactggaacgttatctg
caattgtgcgctgagcaaaatatgcaggtttgtattccgtcaacgcctgcacaggtgtat
cacatgcttcgccgccaggcgctgcgtggaatgcgccgtccgctggtggtcatgtcgccg
aaatccctgttacgccatccgctggcgatctcttcactggaagaactggcgaacggttcc
ttccagccagcgattggtgaaatagaagaattagatccggccgccgtgaagcgtgtcgtg
ctttgttccggcaaggtctactatgatttgctggaacagcgccgcaagaacgagcaaaaa
gatgtcgcgatcgtccgtatcgagcaactttatccgttcccgcatcaggcagtacaagcg
gcactggaatcttttgcccatgttcacgatttcgtgtggtgtcaggaagagccgctgaat
cagggagcctggtattgcagtcagcaccatttccgtgaagtgattccgtttggggcttct
ttacgttacgcaggacgcccggcgtctgcatcacccgccgttggctatatgtccgtacac
cagaaacaacagcaagatctggtcgatgacgcgctgaacgttgattaa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PCT (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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