KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3858
Entry
PC1_3858          CDS       T00934                                 
Name
(GenBank) Pectate lyase/Amb allergen
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00040  Pentose and glucuronate interconversions
pct01100  Metabolic pathways
pct02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pct00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    PC1_3858
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PC1_3858
Enzymes [BR:pct01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     PC1_3858
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-ProteinID: ACT14873
UniProt: C6DGB0
Position
4339465..4340589
AA seq 374 aa
MKYLLPSAAAGLLLLAAQPTMAANTGGYATTDGGDVSGAVKKTARSLQEIVDIIEAAKKD
SSGKAVKGGAYPLVITYNGNEDALIKAAEANICGQWSKDPRGVEVKEFTKGITILGTNGS
SANFGIWIVNSSNVVVRNMRFGYMPGGAKDGDAIRIDNSPNVWIDHNEIFAKNFECAGTP
DNDTTFESAVDIKKASTNVTVSYNYIHGVKKVGLSGSSNTDTGRNLTYHHNIYSDVNSRL
PLQRGGQVHAYNNLYDGIKSSGFNVRQKGIALIESNWFENALNPVTARNDDSNFGTWELR
NNNITSPSDFAKYNITWGKPSTPHINADDWKSTGKFPAVPYSYTPVSAQCVKDKLANYAG
VGKNLAVLTAANCK
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaaatacctactgccttctgcagctgcaggactgttgctgctcgcagcccaaccaaca
atggcggcaaatacggggggttatgccaccactgacggcggcgacgtttccggtgcagtg
aaaaaaaccgcacgttctttgcaagagatcgtcgatatcattgaggcagcgaaaaaggac
tcaagcggtaaagcggtaaaaggcggcgcctacccactcgtcatcacctataacggtaat
gaagatgcgttaatcaaagcggctgaagctaacatctgcggccaatggagcaaagatccg
cgtggcgtagaagtcaaagagttcaccaaagggatcaccatcctcgggaccaacggttct
tccgctaactttggtatctggattgtaaactcttccaacgttgtcgtacgtaacatgcgc
ttcggctatatgcctggcggcgcaaaagatggtgatgctatccgtattgataactcgccg
aacgtctggatcgaccacaacgagattttcgccaagaacttcgaatgtgcaggtacacca
gacaacgacacgacctttgaatcggctgtcgatatcaagaaagcctcaaccaacgtcacg
gtatcctacaactatatccatggcgtgaaaaaggtgggtctgagcggttccagcaacacg
gatacgggtcgtaacctgacttaccatcacaatatttacagcgatgttaactcacgtctg
ccgctgcaacgtggtggccaggtgcacgcatacaacaacctgtatgacggcatcaaaagt
tcaggctttaacgttcgccagaaagggattgctctgatcgaaagcaactggttcgaaaat
gcgctcaaccctgtaactgcacgtaacgatgactccaacttcggtacctgggaattgcgt
aacaacaacattaccagcccgtctgattttgctaaatacaacatcacctggggtaagcca
tccacaccacacatcaatgcggatgattggaaaagcactggcaaattccctgccgtcccg
tatagctacaccccggtttccgcacagtgcgtgaaggataaactggcaaactatgctggc
gtaggtaaaaacctggcagtcctgacagcagctaactgtaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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