KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_4097Help
Entry
PC1_4097          CDS       T00934                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pct00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PC1_4097
Enzymes [BR:pct01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PC1_4097
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PC1_4097
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(4633132..4633941)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGISPYLVDHTILYAEVRNTRLRWPVSGEILSLSDEPVLSVRRRAKYLL
IELTRGWIIVHLGMSGSLRVLPEYSEPEKHDHVDLVMDSGKVLRYTDPRRFGAWLWTDNP
ETCSVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNKVVVGVGNIYASESLFAAG
IHPDRAAGSLNENDAAVLVSVIKQVLQLSIEQGGTTLRDFLQSDGKPGYFAQELRVYGRN
GEPCRTCGTPIETAKHGQRSTFFCRRCQK
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaggttgaaaccagtcgtcgggggatttcaccgtaccttgtcgat
cacaccattctgtatgctgaggtcaggaacacgcgcctgcgctggccggtgtcgggtgag
atcctctcgctgagtgatgagccggtgctgagcgtgcgtcggcgggcaaagtatttgcta
attgaactcacgcgcggctggattattgtgcatctcggcatgtctggcagcctgcgagtg
ttgccggaatatagtgagccggagaaacacgatcatgttgatttggtgatggacagcggt
aaggtgctgcgttacaccgatccacgacgttttggtgcctggctgtggacggataatcca
gaaacctgctcggtcttggcgcatttggggccagagccgttagaggcggaattctccgca
gattatctctatcaggcctcacgcggtaaaaagacggcaatcaaacagtggattatggat
aacaaagtagtcgttggcgtaggcaatatctacgcgagtgaatcgctgtttgctgctggc
atccaccctgacagagcggccggatcgttaaatgaaaacgacgcagccgtattagtgagc
gtgattaaacaggtgctacagctttcgattgagcagggcggcacgacgctacgcgacttt
ttgcaatctgacggtaaacccggctatttcgcgcaggaactacgagtctatggccgcaat
ggtgaaccgtgccggacatgtggaacaccgatcgaaaccgcgaaacatgggcagcgcagt
acgttcttctgccgccgctgtcagaagtaa

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