KEGG   Paenibacillus crassostreae: LPB68_08480
Entry
LPB68_08480       CDS       T05196                                 
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
pcx  Paenibacillus crassostreae
Brite
KEGG Orthology (KO) [BR:pcx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pcx03016]
    LPB68_08480
Enzymes [BR:pcx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     LPB68_08480
Transfer RNA biogenesis [BR:pcx03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LPB68_08480
 Prokaryotic type
    LPB68_08480
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344 Acid_PPase
Other DBs
NCBI-ProteinID: AOZ92255
UniProt: A0A162N725
Position
complement(1780364..1781101)
AA seq 245 aa
MNNYKLKIQYDGGRYKGWQRLGDNDNTVQGKIEKALSELVGHSIEIIGSSRTDAGVHALA
QIANFKISEDIPESKMMTVLNSYLPPDISIPEITLVDDRFHARYHAKDKTYIYKIWNEYY
SHPIMRKYSMHVRKKLDIVQMRKACQYFVGEHDFTAYSNAKSNKKTMVREIYSLDLEESG
GFIQFRVSGNGFLYNMVRKMIGTLIEVGLGEIEAKEIPSILQSKERVQTGGMADACGLYL
EKINF
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaataattacaaactgaaaattcaatatgatggtggtcgatataaaggttggcagcgg
ttaggggataatgacaatactgttcaagggaaaatagaaaaggccttatcagaattggta
ggacactctattgaaatcattggatcgagtagaacggatgcgggagtacacgcacttgct
caaatagctaactttaagattagtgaagatatacctgaatctaaaatgatgacagtattg
aatagttatttacctccagacattagcattccggagattacactagtagatgaccgtttt
cacgcccgctatcatgcgaaggataaaacttatatttataaaatctggaacgaatattat
agccatcctatcatgagaaagtacagtatgcatgttaggaagaagctagatatcgtacaa
atgagaaaagcatgtcagtattttgtcggcgagcatgattttacggcttattccaatgct
aagtctaataaaaagacgatggtgcgggaaatttattctctagatctagaagagagtgga
ggtttcatccaatttcgcgtgagtggaaatggttttctatataatatggttcgaaagatg
attggcacgctgatcgaggtaggcttaggtgagatagaagccaaagaaataccatccatt
ctccaatcaaaggaacgggttcaaaccggtggaatggcagatgcatgtgggctttactta
gagaagattaacttttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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