KEGG   Plasmodium cynomolgi: PCYB_031320
Entry
PCYB_031320       CDS       T02490                                 
Name
(RefSeq) pre-mRNA splicing factor
  KO
K12856  pre-mRNA-processing factor 8
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PCYB_031320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcy03041]
    PCYB_031320
Spliceosome [BR:pcy03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    PCYB_031320
 Complex C
   U5 SnRNP specific factors
    PCYB_031320
SSDB
Motif
Pfam: PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg RRM_4 PROCT JAB DUF6598
Other DBs
NCBI-GeneID: 14691240
NCBI-ProteinID: XP_004220850
UniProt: K6UPT7
Position
3:181372..190616
AA seq 3036 aa
MSDHGGPEQAAEDRSNEAEQQENGVANHDPSRSDTHNYENGQGENVANDQPPLIDNDGMT
RGPMSSAGIPTLPSNMNLFSNHQGPPNNLYYNMAQYDINPNLIELPEKGKNAPTSSAPAA
AGAGATGASFVNGMNSFPPSMSNLPPNMLNMPPLMSSLPPNMANLPPNMANLPPNMPPNM
PPNMANLPPNMPPNMNYLPPNMNPLMPNMMNLPPPPFMMKMKNQINGAGPGMNGMPYYFL
PSGAHMGNYAQTGMEDMTDPFGNNMSHLPPPMYLNESGGAEDYYPYNNDEEDYMRGERRH
NGEDMHDEYISRSERRKRRRRRRHYDEESYYAKMKYNQMEETVEKTVEKEVIQEPTEFNI
MKEKARKWKMINNKKYSKKKKFGVMEEKEEMPCEHLRKIVKEHGDMSNKKYRYDKRVYLG
ALKYVPHAVFKLLENIPMPWEQIKNTKVIYHITGAITFVNEIFVVIDPLYIAQWGTMWIM
MRREKRDRKHFKRMRFPPFDDEEPPLDYADNILDIEPLECIQMKLDKDEDRSVIDWFYDS
KPLLYDRNHILGTSYKKYKLSLEQMGVLYRLGNQLFSDFQDDNYFYLFNLKSFYTAKALN
MAIPGGPKFEPLYRDIYEDDEDWNEFNDINKIIIRQQIRTEYKIAFPYLYNNRPRKIAVS
KYHSPMCVYIKLEDIDLPPFYFDLIINPIPSYKIRKFENPEREKKLLDDFYLIFTRKEVH
YQQVHARGRNGTNSSHSKNRRREHSRDDPTSEYSSDGSAASSEREGRATHSRRRNGRVNK
NEREKYSRERGSKRGDKRDSRRDKKGDYHSSHDATLSDDYQDDRHQENSDRTTYRNGGSK
SRRRASEKGSQHHRSSDDNSDTNVCSSKYRDEDQVDNSTIENYSGDNSSRTGYPRGGKKR
RNPYDGDEGGDCGEDNRDEDNHDDGNRGEDNHDDGNRGPKQLEAKRQEATTPNKLKIVVK
NVQYGMLPLLHEYPLYTERTINGIQLYHAPYPFNKKCGYTRRGIDIPLVQSWFKEHISTK
YPVKVRVSYQKLLKCWVLNHLHSKRPKSMKKKYLFRIFKSTKFFQCTEMDWVEVGLQVCR
QGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKSIV
DSHVQYRLGNIDAYQLADGIQYIFSHVGQLTGMYRYKYRLMRQVRMCKDLKHLIYYRFNT
GSVGKGPGCGMWAPLWRVWIFFLRGVIPLLERWLSNLLARQFEGRVSKGIAKTVTKQRVE
SHFDLELRAAVMHDIIDMIPAGLKNNKGKARLILQHLSEAWRCWKANIPWKVVGLPLPVE
NMIIRYIKLKADWWINATYYNRERIKRGATVDKTVCKKNLGRLTRLWLKAEQERQHEYLK
DGPYVTGEEAVALYTTAIHWFESRKFTHIPFPPLNYKHDTKLLILALEKLKETFTVKNRL
NQSQREELGFIEQAYDNPYETLSRIKRHLLTQRAFKEISISFLDLYTHLVPVYEVDPLEK
ITDAYLDQYLWYEGDLRNLFPNWVKPSDNEPQPLLVYKMCQGINNLHNIWETKNNECLVM
LQTQFSKIYEKIDLTLLNRLLRLIVDHNIADYITAKNNTNITFKDMNHINSFGIIRGLQF
SSFVFQYYTIIIDLLILGLTRAYDIAGPYNDVNPFLSYQNVRVETRHPIRLYCRYVDKIW
ILFKFSNEESKELIQKFLTENPDPNNENIVGYNNKTCWPRDCRMRKMKHDVNLGRATFWE
IQNRIPRSLTSLDWDHHNTFVSVYSKDNPNLLFTIAGFEVRILPKIRQLSYGINMYTTYI
NEYGKKDHPSKETSSSTTNADQSGGGEKNVVISSSEKEGTWKLQNEVTKEITAEAYLKVS
ENSMKRFENRVRQILMSSGSTTFTKIANKWNTTLIGLMTYFREAVLDTEELLDLLVKCEN
KIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHILIPESDLRYMKQTDSGKITH
FRAGLSHEEDQLIPNLYRYISTWESEFLESQRVWCEYALKRNECHNQNKKITLEDLEDSW
DKGIPRINTLFQKDRHTLAYDKGWRIRQLFKQYQIIKSNPFWWTNQRHDGKLWNLNNYRT
DMIQALGGVEGILEHTLFKGTFFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNR
RFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESLVMD
ICQVFDLNSDLLEIETVQKETIHPRKSYKMNSSCADILLFANYKWGISKPSLLSDEDNIF
LNNLEIKSNSSIALGSYPYTSNQYWIDIQLRWGDFDSHDIERYSRAKFLDYTTDNLSIYP
CLTGVLIGVDLAYNLYSAYGNWFNNLKPLMQKALQKIIQSNPSLYVLRERIRKGLQLYSS
EPTEPYLNTQNYNELFSSQTIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFILNPKTGQ
LFLKIIHTSVWIGQKRLSQLAKWKTAEEVASLIRSLPIEEQPKQIIVTRKGMLDPLEVHL
LDFPNIIIKGTELNLPFQALLKLNKIGDLILKATQPQMLLFNLYDDWLNTISSFTAFSRL
ILILRSLHINPQQTKILLQPNKNIVTQPHHIWPSFNNNQWINLEVQLKDLILNDYAKRNN
VHIASLTQNEIRDILLGMEITPPSIQRQQIAELEKNNLDNIEQQMKVTTSKTTTKHGTEM
IVSTLSPHEQQTFTTKTDWKIRYLANNSLLFRTKNIYVNNSSLKSVSQEGGNNGVNTISS
INDYTYVIAKNLLEKFICISDLKIQIGGFLYGSSPPDNSYVKEIKCILIPPQIGNYQSVT
LSNYLPSSKYLDNLELLGWIHTQTTNCSNTSNHLTTYDMVAHLSFLQECKVRKKKKADGA
GGTYSDEDIAPEDNANDDSGEFSKIWDKNKTIILTCSFTPGSCTINAYKLTDDGYTFAKS
KQNSADLYAYPNATNLYEQVQILLSNVFVGFFLIPDDNIWNYNLMGIKFNNNQKYAALLD
IPQPFYSDIHRPNHFLQFSLLDQHDGDEADVETSFI
NT seq 9111 nt   +upstreamnt  +downstreamnt
atgagcgaccatggagggccagaacaggccgcggaagatcgctcgaacgaggccgagcag
caggaaaacggtgtagccaatcatgacccaagcagaagtgacacccataattacgaaaat
ggccaaggagagaacgtagcgaacgaccagcccccactgatagataacgatggcatgacg
agaggccccatgtccagcgcaggaatcccgacactacccagtaacatgaacctctttagt
aaccatcagggtccccctaacaacctatattacaacatggcgcagtacgacattaacccg
aatttgatcgagttgcctgaaaaggggaaaaacgcccccacttcatcagcgcccgcagcg
gcaggagcaggagcaacgggggcgagcttcgtgaacggcatgaattcgtttcctccaagc
atgtcgaacttgccacccaacatgctgaacatgccgcccctcatgagcagcctcccccca
aacatggccaacctgccgcccaacatggccaatctgcctcccaatatgcctcccaacatg
ccgcccaacatggccaacctaccaccaaacatgccgcccaacatgaactacctgccaccc
aacatgaaccccctcatgcccaacatgatgaacctgccccctcctcccttcatgatgaaa
atgaaaaaccaaataaatggcgctggaccggggatgaatggcatgccgtattacttcctc
cccagtggggcacacatgggaaactacgcacaaacaggaatggaggacatgacggacccg
ttcggaaacaatatgagtcacctgcctccacccatgtaccttaacgaaagtggaggagcg
gaagattattatccctacaataacgatgaggaggactacatgagaggggagaggaggcac
aatggagaggacatgcacgatgaatacatatcacgaagcgaacgaaggaaaagaagaaga
aggaggagacattatgacgaagaaagctattatgccaaaatgaaatataaccaaatggaa
gaaacagtagaaaagacagttgagaaggaggtcattcaagagccaactgaatttaacata
atgaaagaaaaggcacgaaaatggaaaatgataaataataaaaaatattcaaaaaaaaaa
aaatttggagtgatggaagaaaaagaagaaatgccatgtgaacatctcagaaaaatagtc
aaagaacatggagacatgagtaacaaaaagtacagatatgataagagagtatacttgggt
gctttgaaatatgtgccacatgcagtttttaagttactagagaatatccccatgccttgg
gaacaaattaagaacacaaaggtaatctatcacattactggggccattaccttcgtgaat
gaaattttcgtcgtcatagatcctctgtacattgctcaatggggaaccatgtggattatg
atgagaagagaaaaaagagatagaaaacatttcaaaagaatgagattcccccccttcgat
gatgaagagcctccactcgattatgcagataatattctagatatagaaccgttagaatgc
atacaaatgaaattagacaaagatgaggacagaagtgttatcgactggttttacgactca
aaacctttgctatatgatcggaatcacattttgggaactagctataaaaagtataaatta
agtttggaacaaatgggggtcctctacagattaggaaaccaactctttagcgattttcag
gatgataattatttttatttgtttaacttgaagtctttctacactgccaaggcgttaaat
atggccataccaggtggaccaaaattcgaacccttgtacagagacatatacgaagatgat
gaagactggaatgagtttaatgatattaacaaaattattatacgtcaacaaattagaacg
gaatacaaaattgccttcccttatttgtataataataggccaagaaaaattgctgttagt
aagtaccactctcctatgtgtgtctacatcaagttggaggacatagatctaccccctttc
tacttcgaccttattatcaatcccattccatcttacaaaatcagaaaatttgagaaccca
gagagggagaaaaaactcctagatgacttctatctcatttttacaagaaaggaggtacac
taccagcaggtgcatgcccgcggaagaaatgggaccaattctagtcacagtaaaaatcgg
agaagggagcattccagggatgatcccacaagcgagtatagtagtgatgggagcgctgcg
agtagtgagcgagaaggaagggcaactcattccagacgcagaaatggtagggttaacaaa
aacgagagggaaaagtactcgagagaacgaggaagcaagcgaggagataaacgtgactcc
aggcgggacaaaaaaggtgactatcactccagccatgatgcgaccctgtcagatgactac
caggatgaccgtcatcaggagaacagcgacaggacaacgtacaggaatggtggaagtaaa
agtaggcgaagggccagcgagaagggcagccagcaccaccgcagcagcgatgacaacagc
gacacgaacgtttgcagcagcaagtatagggacgaggaccaggtagacaatagcacgata
gagaactattcgggggataacagctccaggacgggttaccccaggggcggcaaaaagagg
aggaacccctacgatggggatgaaggcggcgattgtggcgaagataaccgtgacgaagat
aaccacgatgatggtaaccgtggcgaagataaccacgacgacggtaaccgcgggccgaag
cagctcgaagccaaacggcaagaagccacaactccgaataagctcaaaatagtagtcaaa
aatgtgcagtacggaatgctgcccctgttgcacgagtaccccctctacacggaaagaacc
atcaacggaattcaactctaccatgccccctacccatttaacaaaaaatgcggatacaca
aggagaggaatagacatccccctagtgcagtcctggttcaaagaacacatatcgaccaag
tatccagtcaaggtgagggtctcctaccaaaagctactcaaatgttgggtactaaaccat
ctgcactccaagagaccaaaaagtatgaaaaaaaagtatctatttagaatatttaaaagt
accaaatttttccagtgcacagaaatggattgggtcgaagtaggtctacaggtatgtaga
caaggatacaatatgctcaatttgttaatccatagaaaaaatttgaactaccttcatttg
gattacaatttcaatttgaaaccagtcaaaacgttaaccaccaaggagaggaagaagtct
cgttttgggaacgcctttcacctgtgcagagaaatcctaagactaaccaaatcgatagta
gattcgcatgttcaatatagacttggaaatattgatgcgtatcaactggccgatggcata
cagtatatattttcccacgtgggtcaactgactggaatgtatagatataaatatagactt
atgagacaagtaagaatgtgtaaagatttgaagcatttaatttattacagatttaacaca
gggtctgtagggaaaggtcctggttgtggaatgtgggcacctctgtggagagtgtggatt
ttcttccttagaggagttatacccttgttagaaagatggctgagtaatttactggcgaga
caattcgagggaagagtctccaaagggattgctaaaacggttaccaagcaaagggttgaa
agtcactttgatttagaactcagagcagctgtcatgcatgatataatcgatatgattcct
gctggattgaaaaataataaaggaaaagctagactcattttgcaacatcttagcgaagca
tggagatgttggaaagccaatatcccttggaaggtcgtcgggttgcctctccctgtggaa
aatatgatcattcgatatattaagttgaaggcagattggtggattaacgctacttactat
aatagggagaggattaagagaggggctactgtggacaaaacggtgtgtaagaaaaatcta
ggtaggctaaccagactctggctgaaggctgaacaggaaaggcagcatgaatacttaaag
gatggtccttacgtcacaggagaagaagccgtcgcactgtacaccacggcaattcactgg
tttgaatcgcgtaaatttacacacattccttttcctccactgaattataagcatgacacc
aagttactcattttggctctagagaaactgaaggaaacctttaccgttaaaaatagacta
aaccaatcgcagagggaagaactcggcttcatagaacaggcgtacgacaacccgtatgaa
acgctgtctagaataaaaaggcacctactcactcagagagcattcaaagaaatatccatc
tcgttcctagacctatacacacacttagtgcctgtgtacgaagtagacccgctagaaaaa
attacagacgcttacctagaccagtatctgtggtatgagggagacctaagaaatttattt
cccaattgggttaagccctccgacaacgaaccccagccattactagtctataaaatgtgt
caggggataaataacctacacaacatttgggaaaccaaaaacaatgaatgcctggtaatg
ctccaaacacagttcagtaaaatatacgagaaaatcgatttgactctcctgaacagattg
ctacgtttgattgtggaccataacattgccgattacataaccgcaaagaacaatacaaat
attacctttaaagatatgaaccatataaactcctttgggattattcgaggactacaattc
tcttcctttgtatttcaatactacaccattattatcgatttactcatcctagggttgaca
agagcgtacgacattgctggtccgtataacgacgtgaacccttttcttagctaccagaat
gtgcgtgtggagacgagacatccgatcagactgtactgtagatatgtagacaaaatttgg
atcctcttcaaattttccaatgaagaatccaaagaattgatacaaaaatttttaacagaa
aatccagacccaaataatgaaaatatcgttggttataataacaagacttgctggccaagg
gactgtcgaatgagaaaaatgaagcatgatgttaatctgggcagagcaacattctgggaa
attcaaaatagaatccccagatcgttgacttcgctagattgggatcatcacaataccttt
gtgagcgtctattcgaaggacaaccctaatttacttttcaccattgccggatttgaagtc
cgcattttgccaaaaataaggcaactttcgtacggcattaacatgtatactacgtatata
aatgagtatggaaagaaggaccaccccagtaaggagacttcctcatccaccacaaatgcg
gatcaatccgggggaggagaaaaaaacgtggtcatatcatccagcgaaaaggaaggcaca
tggaagctgcaaaacgaagttaccaaagaaatcactgcagaggcgtacctaaaagtttca
gaaaatagcatgaagagatttgaaaatcgagtcagacaaattttaatgtcatcaggaagt
accacatttaccaaaattgcaaacaaatggaataccaccctcatcggattgatgacctat
ttcagagaggccgtcttagacacagaagagttgttagacctgctagtaaaatgtgaaaat
aaaatacaaactcgtataaagataggtctaaattcgaagatgccttctcgttttccccca
gtggtattctacacacctaaagaattgggtggcctaggaatgctctccatggggcatata
ttaatcccagagtcggatctacgttatatgaagcaaacggacagtgggaaaattactcat
tttagagccggtctatcccacgaagaagaccaactgatccctaacctgtatagatacatc
tccacctgggaaagtgaatttttagagagccaacgagtatggtgtgaatacgcacttaag
agaaatgaatgccacaatcaaaataagaaaatcacattggaagatttagaagactcttgg
gataaaggtatccccagaattaataccctctttcagaaagacagacatactttggcatac
gacaaggggtggagaataaggcaactcttcaagcaatatcaaattattaagagtaatccc
ttttggtggaccaaccagagacacgatgggaagctgtggaatctgaacaactatcgaacg
gacatgattcaagccctgggaggagttgaagggatactagagcatacactatttaaaggt
accttcttccccacatgggaaggactattttgggagaaggccagcggatttgaagaatct
atgaaatataagaagctaaccaatgcgcagagaagtggactgaaccaaattccaaataga
agatttaccctgtggtggtctccaacaatcaatcgtgcaaatgtatacgtagggttccaa
gtgcagttagacctaacaggtatattcatgcatggaaaaattcccacactgaaaatatcg
ctcatccagatatttagagcacatttgtggcagaagattcacgaatcgctagttatggat
atttgtcaagtcttcgatttgaattcggatctgctcgaaatcgaaacggtgcagaaggag
accatccacccgaggaagtcctataaaatgaatagctcctgtgcggatattctcctcttt
gccaattacaaatggggtatttcaaaaccgtctctactctcagatgaagataacattttt
ctgaacaatttggaaattaaatcgaacagttcgatagccttggggtcttatccctacacg
tccaatcagtactggattgacattcagctccgatggggagacttcgattcccatgacatt
gaaaggtacagccgagccaagttcctagattacaccacagataatttatctatatatcca
tgcctcacgggggtcctaataggagtagacttggcatacaatctatactctgcatatgga
aactggtttaacaatctcaaaccgttgatgcagaaggcgctacagaaaattattcagtcg
aacccctcgctctacgtgctcagggaaagaattcgaaaaggacttcaactatattcatca
gaacccacagaaccgtatctaaatactcaaaattataatgagcttttctcatctcagacc
atctggtttgtggatgataccaacgtttaccgagttaccatccataagacctttgaaggg
aatcttaccaccaagccgattaatggtgccatcttcattttgaacccaaagacaggacag
ctctttttaaaaattatccacacatctgtatggattggacagaagcgtttatcccagcta
gccaaatggaaaacagcagaggaagtggcttccctaattaggtctctccctatagaagaa
caaccaaaacaaattatcgtaaccagaaaaggaatgctagatccgttggaagtgcatttg
ctagattttcccaatattataataaaaggaacggagttgaatctcccatttcaagcctta
ctaaagctgaacaaaataggagacctcatcttaaaggcaacccagccacagatgcttctg
ttcaatttgtatgacgattggctaaatacaatttcgtccttcacagcatttagtagacta
atcctcatactgagaagtttacacataaatccacagcaaacaaaaatactcctgcaaccg
aataaaaacatagtaacacagcctcatcatatatggccctccttcaacaataaccagtgg
attaatttagaagtccaacttaaagacctaattcttaacgattatgcgaagagaaacaat
gtacatatcgcctcactaactcagaacgaaataagggacatcctgttaggtatggaaata
actcctccatccatacagaggcagcaaattgcagaactagaaaaaaacaatttagataac
atagaacaacaaatgaaggttacgacgtcaaaaacaaccacgaaacatggaacggaaatg
atcgtctcaacgttatcccctcatgaacagcagacattcacaacaaagactgattggaaa
atacgataccttgcgaataactctctactctttagaaccaaaaatatttacgtcaataat
agttcactaaagagtgtatctcaagaaggaggaaacaacggtgtgaataccatcagctcc
attaacgattacacatacgttattgccaaaaatttacttgaaaaatttatttgcatttcc
gatttgaaaatacaaattggcggttttctgtatggttcttccccacctgacaactcgtat
gtgaaggagatcaaatgcattcttatccccccacagattgggaactaccaatctgttact
ttgtcaaattatctcccctcgagtaaatatttagataatttagaactcctggggtggatt
catactcagaccaccaactgctccaacacgtctaaccacttaacgacttacgacatggtt
gcacatttatcatttctacaagagtgtaaagtcaggaagaagaaaaaagcagatggagca
gggggaacctactccgatgaagacatcgcacctgaggataatgctaatgacgatagtgga
gagttctccaaaatatgggacaaaaataaaacgataattcttacttgttcatttactcca
ggtagctgtaccatcaatgcttacaaattaacagatgatggttatacctttgcgaagagt
aaacaaaattcagctgatctgtatgcctacccgaatgccactaatctgtatgaacaagtt
cagattttactctccaatgtctttgttggtttctttttaatccccgatgataatatatgg
aactacaatctgatgggtatcaaatttaacaataatcaaaaatacgctgcgctgttggac
atccctcaacccttttactctgacatacacaggcccaaccactttctccagttttccctg
cttgatcagcacgacggggatgaggcggatgtcgagacgtcgttcatttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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