KEGG   Pseudomonas chlororaphis PCL1606: PCL1606_09540
Entry
PCL1606_09540     CDS       T03768                                 
Name
(GenBank) 23S rRNA pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
pcz  Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:pcz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pcz03009]
    PCL1606_09540
Enzymes [BR:pcz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     PCL1606_09540
Ribosome biogenesis [BR:pcz03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PCL1606_09540
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AKA22409
UniProt: A0A0E1EB92
Position
981287..982249
AA seq 320 aa
MSDKIELRAEVPSELGGQRLDQVAAQLFAEHSRSRLSAWIKDGRLTVDGAVIRPRDIVHG
GAVLELTAEQEAQGEWIAQDIELDIVYEDDDILVINKPAGLVVHPAAGHADGTLLNALLH
HVPDIINVPRAGIVHRLDKDTTGLMVVAKTIQAQTQLVAQLQSRSVSRIYECIVIGVVTA
GGKINAPIGRHGQQRQRMAVMEGGKQAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMA
HINFPLVGDPAYGGRFRIPPAASPTMVESLKHFPRQALHARFLELDHPTTGERMSWESPL
PEDFVWLLTLLKQDREAFVG
NT seq 963 nt   +upstreamnt  +downstreamnt
atgtccgataaaattgaacttcgcgcagaggtgccgtccgaactgggcggccaacgcctc
gatcaagtcgccgcccaattattcgccgagcactcgcgctcgcgcctttccgcctggatc
aaggacggccgcctgacggtggatggcgcggtgatccgcccgcgcgacatcgtccacggc
ggcgccgtgctcgagctgaccgccgagcaggaagcccagggcgaatggatcgctcaggac
atcgagctggacatcgtctatgaagacgacgacatcctggtcatcaacaagccggcgggc
ctggtggtccaccctgcggccggccatgccgacggcacgctgctcaacgccttgctgcac
cacgtcccggacatcatcaatgtgccgcgcgccggcatcgtccaccgcctggacaaggac
accaccggcctgatggtggtggccaagaccatccaggcgcagacccagctggtcgcccag
ttgcagagccgcagcgtcagccgcatttatgaatgcatcgtgatcggcgtggtcactgcc
ggcggcaagatcaacgcgccgatcggccgtcatggccagcagcgccagcgcatggcagtg
atggaaggtggcaagcaggccgtcagccattaccgtgtgctcgagcgtttccgttcccac
acccatgtgcgggtcaagctggaaaccggccggacccaccagatccgcgtgcacatggcg
cacatcaacttcccgttggtcggcgatccggcctacggcggccgtttccgcatcccgccg
gcggcgagcccgaccatggtcgagtcgttgaagcacttcccgcgccaggcgctgcatgcg
cgtttcctggagctggatcacccgaccaccggtgagcgcatgagctgggaatcgccgctg
ccggaagatttcgtctggctgttgaccctgctcaagcaggaccgcgaggcctttgtcgga
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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