KEGG   Phoenix dactylifera (date palm): 103701991
Entry
103701991         CDS       T03274                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03420  Nucleotide excision repair
pda04120  Ubiquitin mediated proteolysis
pda04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103701991
   04120 Ubiquitin mediated proteolysis
    103701991
  09124 Replication and repair
   03420 Nucleotide excision repair
    103701991
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pda04121]
    103701991
   03400 DNA repair and recombination proteins [BR:pda03400]
    103701991
Enzymes [BR:pda01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     103701991
Ubiquitin system [BR:pda04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   103701991
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     103701991
   Cul2 complex
     103701991
   Cul3 complex
     103701991
   Cul4 complex
     103701991
   Cul7 complex
     103701991
   Cul8 complex
     103701991
   Cul9 complex
     103701991
DNA repair and recombination proteins [BR:pda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103701991
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103701991
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF4644 zf-RING_16
Other DBs
NCBI-GeneID: 103701991
NCBI-ProteinID: XP_008782469
UniProt: A0A8B7BP24
Position
6:1207624..1217764
AA seq 119 aa
MASLDTDINMVPIGEGSSGAAGPSSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHI
MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 360 nt   +upstreamnt  +downstreamnt
atggcatcgttggatacggacatcaacatggttcccatcggcgagggatcgagcggcgcc
gccgggccgtcgtcgtcctccaagaagccgaagcgcttcgagatcaagaagtggaacgcc
gtcgccctctgggcctgggatatcgtcgtggataactgcgctatttgcaggaaccacatc
atggatctctgcatcgagtgccaggcgaatcaagctagcgcgactagcgaggaatgcact
gttgcttggggtgtctgcaatcatgcttttcacttccattgcatcagtcggtggctcaag
actcgtcaagtttgccccttggacaacagcgagtgggagttccagaagtacggtcactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (48)   

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