KEGG   Phoenix dactylifera (date palm): 103704818
Entry
103704818         CDS       T03274                                 
Name
(RefSeq) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
pda  Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:pda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pda03016]
    103704818
Enzymes [BR:pda01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     103704818
Transfer RNA biogenesis [BR:pda03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    103704818
 Prokaryotic type
    103704818
SSDB
Motif
Pfam: PseudoU_synth_1 V4R DUF835
Other DBs
NCBI-GeneID: 103704818
NCBI-ProteinID: XP_008786491
UniProt: A0A8B7BVW3
Position
14:8767058..8781839
AA seq 414 aa
MSGASTHKTHAHPLRVVRSFLDAAMSDDGGRPSQAAGSPDSQHDSKRFLDPPLDSSKPSK
LSRSITEGEAGAEEAKDRVEEGREIMSQNSRIQRYLVAVEYIGTRFSGSQKQPTCRTVVG
VLEEAFHKFVGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRA
VNHFLQKNEGDIMVIDVRCVPANFHARFKALERTYHYRILYGPEPLSTFDKERAWHVSEE
LDIPAMKKACSILVGCHDFSSFRAAGCQANSPIRTLDELNVTEVFPSLYFPSISERTEME
SLNGHHSNTSELESFTECSNVSHMSVGKCNAETGQEFGQRSRHRCYVITARARSFLYHQV
RLMVGALKSVGTGDLTFSDVERILNAKTITAASPMAPACGLYLGNVKYDFHEFS
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtccggggcctcaactcataaaacccacgcgcaccctctgcgagtcgttcgatctttt
ctcgatgcggcgatgagcgacgacggcgggcgtccatctcaagcggcgggatcgccggac
tcgcagcacgactcgaagcgattcctcgaccctcccttggattcctcgaagccgtcgaag
ctttcgagatctataacggaaggcgaggcgggtgcagaggaggcgaaagatcgggtagaa
gaggggcgcgagatcatgagccaaaactctagaatccagaggtatttggtggcggtagag
tacattgggacccggttctcgggatcccagaagcagcccacctgcaggaccgtcgtcggc
gttcttgaggaggcttttcataaatttgttggacagcctgtttctatcttctgctctagt
agaacagatgcaggagtacatgctttatcaaatgtatgccatgttgacgtggagcgcata
agtaaaagaaagcctggtgaagtgttgccacctcatgaacctggagttgttagacgtgct
gtgaaccatttcttacagaagaatgaaggtgatataatggtgattgatgttcgatgtgtc
ccagcaaattttcatgctagattcaaggccctagagcgcacgtaccactaccgcatactc
tatgggccagagcccttatcaacctttgacaaagagcgtgcctggcacgtttcagaggag
ctagatatacctgctatgaagaaagcatgcagcatacttgttggttgtcatgatttcagt
tcatttagggctgctggctgccaggcaaactctcctattagaaccctagatgaacttaat
gttactgaagtttttccatctctttacttcccatcaatttcggagagaacagagatggaa
tccttgaatgggcatcattctaatacatcagaactggaatcattcacagaatgttctaat
gtctctcatatgagtgtcgggaagtgcaatgctgaaactggtcaagagtttggccaaaga
tcaaggcatcgttgctatgttataacagcacgagcacgctcttttctctaccaccaggtc
agactaatggttggtgccctaaaatctgttgggactggagacttaacatttagtgatgtc
gaaagaattctgaatgcaaagacgatcactgctgcaagtcctatggctcctgcttgtggt
ctctaccttggcaatgtgaaatatgattttcatgaattttcttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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