KEGG   Phoenix dactylifera (date palm): 103705613
Entry
103705613         CDS       T03274                                 
Name
(RefSeq) nuclear pore complex protein NUP88
  KO
K14318  nuclear pore complex protein Nup88
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103705613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pda03019]
    103705613
Messenger RNA biogenesis [BR:pda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103705613
SSDB
Motif
Pfam: Nup88 RlaP
Other DBs
NCBI-GeneID: 103705613
NCBI-ProteinID: XP_008787622
UniProt: A0A8B7BXS9
Position
4:complement(16341846..16354420)
AA seq 837 aa
MEAAWRRQGGSYRHHDAFSASSPSSFSSSPPHPQAASAATKKASTPQAVEWVALQKHPVF
SGPRCTPTESSGRSGNLAAWDASSSRLYLWDPEARCLHRLSLRFRDPQPDSSSSVFAEAA
VPSELLLPDIQIQFVVNYISLNIDGSSLLFVGSGSLSLMYLFERTYKNDNTFTCRTVSVA
SQILFGHNNGLQTLRVSWHPYSSSHLGILSSDSVFRLFDLSSDLERPEQEYYLQPFEPGR
CHNAASICPVAFSYGGQHLWDRFSIFVLYSDGSVYALCPVVPFGSLCSRAYVEEIYEDMN
EFGLKSSDLKVVSNSRLAIDWLEATFPDLADQSFEEGSVLASRAHPYAPIDASLSLQGPL
GKICPGEENHDFQSSAGCDGRAVDLLYCSIDKDSVLVTAWSSGQLQIDALADEVQPHWNN
GSPPHLNVDSSGHIKSIAMICELNMREVSTLKSSQSLDLVSNISSTADMIWVGCPPPLLR
LAIVDLALPKNALNNCQLSLFSDPLVSEKFCCLHGGGIDLVTLHFLPFTNLSSAPDKIAK
APSVHPILSTGINASFSPVLSGFVSIADPYGHSLIIGITSSYECILLGMKGWNELPPHLY
DMDTKSVDDTENAIPEIISKELLDGPKVILVPPSTTLQSLTADSIEGRSTLHHYIKLFHE
NYVEYAHKVYIELKEHAGYLKTIIEDQHKHLHETKQLLLNVEAKEQGIKNRTDRAFKVYE
LLEQRLQNFKKLPGASKKPLSRAEREFKAELERFADLELDALHSSIESLNARLKRYSQSS
PVSSRNASRQTPVRGKSHVSDAQTLQLKSSLQKLSSLNIDNAKKVKLIENELKNQEK
NT seq 2514 nt   +upstreamnt  +downstreamnt
atggaagctgcgtggcggcggcagggcggcagctaccgccatcacgatgccttctccgcg
tcttctccttcctctttctcttcttcccctccccatccgcaagcggcttcggctgccacc
aagaaagcctctacgccccaagcagtagagtgggtggcgctccagaagcaccccgtcttc
tccggcccccgctgcacgccgacggagagcagcggcagaagcggcaacctggcggcatgg
gacgcttcgtcgtcacgcctctacctgtgggacccggaggcccgctgtctccaccgtctc
tcccttcgcttccgcgacccccaacccgattcctcctcctctgtcttcgcggaggccgcc
gtcccttctgagttattgttgccagatattcagatccaatttgtggtcaactatatttct
ctcaatatagatggatcatcattattatttgttggctctggcagcctcagcctcatgtac
ttatttgaaaggacttataagaatgacaatacatttacttgcaggacagtttcagttgct
tctcaaatattgtttggccacaacaatggtttacaaactttacgagtatcatggcaccct
tacagtagtagtcatttgggcattttgtcatcagattcggttttcaggctatttgatttg
tcatctgatttagagcgaccagagcaggaatactatctgcagccatttgaacctggaaga
tgccacaatgctgcatcaatctgcccagtggcattctcatatggaggtcaacatttatgg
gatagattttctatatttgttctatatagtgatggctcagtctatgccctttgcccagtt
gttccttttggaagtctctgcagtcgggcatatgtagaagaaatttatgaagacatgaat
gagtttggattgaagtcatcagatttaaaagttgttagcaactcacgtttggctattgat
tggttagaagcaacatttccagatttagcagatcaatcatttgaggaaggcagtgtattg
gcatcaagagctcatccgtatgccccaatagatgcatctctttcactacagggtcctctt
ggtaaaatttgtcctggtgaagagaatcatgatttccagagcagtgcaggttgtgatggc
agggctgtagatcttctttactgttctattgacaaggattcagttcttgtgactgcctgg
agcagtgggcagctgcagattgatgccctggcagatgaagtccaacctcactggaacaat
ggtagtcctccccaccttaatgtggattcttctggtcatataaagagcattgctatgatt
tgtgagttgaatatgcgagaagtttctactttaaaatccagccaatcacttgacctggta
tcaaatatcagcagtactgcagatatgatttgggtgggatgtccacctcctttgctcagg
ctggctattgtagacttagcactgccaaaaaatgcattgaataattgccagctttctttg
ttttctgatcctcttgtttcagagaaattttgctgtcttcatggtgggggaatagacttg
gtaactttgcattttctgcctttcacaaatctatcttctgcaccagacaagattgcaaaa
gcaccttctgtgcatcctatcctcagtacaggcattaatgcttctttctctccagtgctc
tctggttttgtttcaatcgctgatccatatggtcattcactaataattggaatcacatcc
tcttatgagtgtattctgctagggatgaagggttggaatgaattaccaccccatctttat
gatatggacactaagtctgttgatgatacagaaaatgctatccctgagattataagcaaa
gagcttcttgatggtccaaaggtcatccttgttcctccttcaacaactcttcaatcttta
actgctgattcgattgaaggacgatcaactcttcatcactatatcaagctttttcatgag
aactatgtggagtatgcacacaaggtctatattgaactcaaagagcatgcgggttatcta
aaaacaataattgaagaccaacataaacatttgcatgagacaaagcagttgcttctgaat
gttgaagccaaagaacaaggcataaaaaatcggaccgatcgtgccttcaaggtatatgaa
cttttggagcaacgtctacagaatttcaaaaagttacctggagcaagcaagaaaccatta
tcaagagcagaacgtgaatttaaggccgagcttgaaagatttgcagatttagagttggac
gccttgcactcttctattgaatctttgaatgcaaggctgaaaagatatagtcagtcttca
ccagttagttcacggaatgcttccaggcaaacaccagttaggggaaagagccatgtgtca
gatgctcagacgttgcaattgaaatcatctctgcaaaagctttccagtcttaacattgat
aatgccaagaaggtaaaactcattgaaaatgaactgaagaaccaggagaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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