KEGG   Phoenix dactylifera (date palm): 103709416
Entry
103709416         CDS       T03274                                 
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103709416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pda03032]
    103709416
   03400 DNA repair and recombination proteins [BR:pda03400]
    103709416
Enzymes [BR:pda01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     103709416
DNA replication proteins [BR:pda03032]
 Eukaryotic type
  DNA Topoisomerases
   103709416
DNA repair and recombination proteins [BR:pda03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     103709416
   FA (Fanconi anemia) pathway
     103709416
SSDB
Motif
Pfam: Topoisom_bac Toprim
Other DBs
NCBI-GeneID: 103709416
NCBI-ProteinID: XP_008792952
UniProt: A0A8B7C6T9
Position
9:9985721..10025542
AA seq 864 aa
MAPKVLMVAEKPSIALSVASALSGGRMSTRRGSTDVHEFDGMFRGLHAHFKVTSVIGHVF
SVDFPPTYQNWEVTDPMDLFQAPILKSESNPKAHIRRHLSQEAKGCGYLVLWLDCDREGE
NICYEVIDCTGIHENDAGRRIYRARFSSVTEKDILKAMDNLVAPNKDEALAVDARQEIDL
KVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYMQITTFKPEKYWSLNPC
IIKDGYELRLEWDRNKVFDYDVAVMFQKLVSDNHTLKVTDISTKEECKNRPCGLNTVNML
KVASSALGFGPHMAMQLAERLYTQGFISYPRTESTAYPSSFDFRAALGVQLYNPIWGNDV
RALLADGFHKPRCGLDAGDHPPITPMRSATEDMLGNDAWRLYQYICQHFIGTVSPDCHYT
RTKVEFAAGGELFHSVGQRVTAKGFTSIMPWMAVGEKNLPQFTKGEKIDILKVDLYEGST
SPPDYLSESELISLMEKNGIGTDASIPVHINNICERNYVQVNSGRRLVPMALGTTLIRGY
QCIDPDLCLPDIRGFIEQQIALIAKGKADHIHVVQHVLQQFKQKYTYFVRKIENMDALFE
AQFSPLADSGRLLSKCGKCTRYMKYISAQPQRLYCVTCEEVYYLPQNGTIKLYKELACPL
DGFELVLFSMAGPDGKTFPLCPYCYNSPPFEGIDKLFGALKLGSSGKIGKGAGMPCFLCP
HPTCRHSLISQGVCACPECSGTLVLDPVSAPRWRLYCNMCNCLVSLPQGAHRISTTGKKC
PECDSTIIEVDFNKRTTPLSDGATLHVGCILCDELLHSLVEMKHGKSFFRRGRGRGRGRG
RASSRGRGRGRSKYEDPKMSFRDF
NT seq 2595 nt   +upstreamnt  +downstreamnt
atggcgcccaaggttctaatggtcgcggagaagcccagcatcgctctctcggtagcctcg
gcgctttctggtggtcggatgtctacacggaggggcagtactgatgtacatgagtttgat
ggaatgtttcggggacttcatgcacatttcaaagtgacatctgttattggtcatgtcttc
agtgtagattttccaccaacataccagaactgggaagtgactgatccaatggatcttttc
caagcaccaattttgaagtcagaatcaaacccgaaggctcatattcgtaggcatctgtct
caagaagctaaaggatgcggctacttggttttatggttggattgtgatcgtgaaggtgaa
aatatatgctatgaagttattgactgtactggaatacatgaaaacgatgctggaagaaga
atttaccgtgctcgattttcatctgttactgagaaagatatattgaaggccatggacaac
cttgttgcacccaacaaagatgaagcattggctgtagatgcacgccaagaaattgatttg
aaggttggagtagcctttactcgatttcagactcgctattttcaggggaagtatggaaac
cttgattctagagtcatttcctatggcccatgtcaaactcctactctgggattctgtgta
cagcgttatatgcagattactacatttaagccagaaaagtattggtctttgaatccttgt
ataataaaagatggttatgaactacgtttagaatgggatcgtaacaaagtatttgactac
gatgttgccgtgatgtttcaaaagctggtatctgataatcatactctaaaagtgacagat
atttcgacaaaagaagagtgcaaaaatcgcccctgtggccttaacacagttaacatgctg
aaggttgcctcaagcgcactagggtttggacctcatatggcgatgcagttagcagagaga
ttatacactcaaggctttatcagttatccacgtacagagagcacagcatacccttcatca
tttgactttagagctgcacttggtgtacaactatataaccctatatggggcaatgatgtg
cgggcactactagctgatggttttcataagccgcgatgtggattagatgcaggtgaccat
cctcccattactccaatgcgatcggcaacagaggacatgttaggaaacgatgcttggaga
ctgtaccaatacatttgtcagcattttatcggcactgttagccctgattgtcattataca
aggactaaagtagaatttgcagctggtggggagctgtttcactcagttgggcaacgtgtt
actgctaaaggattcacatctatcatgccatggatggcagttggtgagaagaatcttccg
cagtttactaagggggagaagattgatattctaaaagttgacttatacgagggcagtaca
tcacctccagactacctcagtgagagcgagctaatttcgctcatggaaaagaatgggata
ggtacagatgcttcaattcctgtacacataaacaacatctgcgagcgcaactatgtgcag
gtcaattctggaaggaggttggtaccgatggccctagggaccactctgataaggggatat
caatgcattgatccagacctttgtttgccagacatccgcggctttattgagcagcagatc
gccctgattgctaaaggaaaagctgatcatatccatgttgtgcagcacgtccttcaacaa
tttaaacagaagtatacttacttcgttagaaagattgaaaacatggatgctctctttgaa
gcacagttctcacccttagcagactcggggcgtctgctgagcaaatgtggaaaatgtact
cggtacatgaaatacatttctgctcagccacaacggttatattgtgtgacttgtgaggag
gtctattacctccctcagaatggcaccataaagctttacaaggaacttgcatgccctcta
gatggctttgagttggtgctcttttccatggcaggccctgatgggaagacattcccactc
tgcccctattgctataatagccccccatttgaaggaattgacaaactgtttggtgccctc
aagcttggaagttctggaaagataggaaagggagcgggtatgccatgctttctctgccct
catccaacatgtcgacactctctaatatcccaaggagtttgtgcttgccctgagtgcagt
ggtacacttgtcctcgatccagttagtgcacccagatggaggctttactgcaacatgtgc
aactgccttgtctccctcccacagggtgctcatcgaatctcaactacaggcaagaagtgc
cctgaatgtgactcaacaatcatcgaagtggactttaataagaggacaacacccctgagc
gatggagcaactttacatgtgggttgcatcttgtgtgatgagttactgcattcgctcgtg
gagatgaagcatggcaaatcttttttcaggcgcggaagagggagaggtagaggtcgaggg
agagcaagcagcaggggtaggggtaggggtcgctcaaaatatgaggatccaaagatgagt
ttccgagatttctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (42)   

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