KEGG   Phoenix dactylifera (date palm): 103710413
Entry
103710413         CDS       T03274                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103710413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pda03019]
    103710413
Messenger RNA biogenesis [BR:pda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103710413
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     103710413
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 103710413
NCBI-ProteinID: XP_008794330
UniProt: A0A8B7C941
Position
7:2393178..2394617
AA seq 275 aa
MSSILPKNETVQIREVWNDNVDVEFALIREIVDDFPYVAMDTEFPGIVARPLGNFKTSSD
FNYATLKANVDMLKLIQLGLTFSDESGNLPTCGTGHGCVWQFNFREFDVHHDIFATDSIE
LLRQSGIDLKKNNERGIDANRFGELLMSSGIVLNDSVHWVTFHSGYDFGYLLKLLTCQNL
PDTQPGFFNLIKIYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT
SCTFRKLKESFFNGATERYAGVLYGLGVENGQNTH
NT seq 828 nt   +upstreamnt  +downstreamnt
atgtcgtccatcctgcccaagaacgagaccgtccagatccgggaggtgtggaacgataac
gtcgacgtggagttcgccctgattcgcgagattgtcgatgatttcccctatgttgccatg
gacaccgagtttccgggcatcgtcgcccgccccctcggcaacttcaagacgagctccgac
ttcaactacgccaccctcaaggccaacgtcgacatgctgaagctgatccagctggggctc
accttctcggacgagtccggcaacctcccaacctgcggcaccggccacggctgtgtctgg
cagttcaacttccgggagttcgacgtccaccatgatatatttgcaaccgactccatcgag
ctcctccgccagagcggcatcgatttgaagaagaacaatgagaggggcatcgacgccaac
cgcttcggagagcttctcatgtcgtccggcatcgtgctcaatgactctgtccactgggta
acctttcatagtggctatgatttcgggtaccttctcaagctgctcacttgccagaacctt
cccgatacccagcccggcttctttaatctgatcaagatttacttcccgacggtatatgac
atcaagcacctgatgaagttctgcaacagcctccatggcgggctcaacaagctcgcggag
ctgctggatgtcgagagggttgggatctgccaccaggccggatcggacagcctgctcacc
tcgtgcacgtttaggaagttgaaggaatcgttcttcaacggcgccactgagagatatgca
ggcgtgttgtatggtctgggtgttgagaatggacagaatactcattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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