KEGG   Phoenix dactylifera (date palm): 103711492
Entry
103711492         CDS       T03274                                 
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
  KO
K12856  pre-mRNA-processing factor 8
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103711492
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pda03041]
    103711492
Spliceosome [BR:pda03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    103711492
 Complex C
   U5 SnRNP specific factors
    103711492
SSDB
Motif
Pfam: PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB
Other DBs
NCBI-GeneID: 103711492
NCBI-ProteinID: XP_008795869
UniProt: A0A8B7CBQ6
Position
1:21859022..21873110
AA seq 2363 aa
MWNSGASSSSSQMPPPPPPPVAPPGTTGGTGVPPPPAVQPSYSIPPSPAELEAQLVEKAR
KWHQLNSKRYGDKRKFGFVEAQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFV
PHAVYKLLENMPMPWEQVRNVKILYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREK
RDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEAIQLELDEEEDSAVYTWFYDHKPLVK
TKLINGPSYRKWHLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGG
PKFEPLYRDMEKGDEDWNEFNDINKLIIRQPLRTEYRIAFPHLYNNRPRKVKLGIYHTPM
IMFIKAEDPDLPAFYYDPLINPITSINKVDRREKKVYEEDDEDDFSLPDGVEPLLQNTQL
YTDTTAAGISLLFAPRPFNTRSGRTRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKC
FVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNL
NYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQ
LADGLQYIFAHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPM
WRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDV
LDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNV
AHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTT
VHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDN
PHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKR
HLFPNWVKPADSEPPPLLVYKWCQGINNLQGIWDTSDGQCVVMLQTKFEKFFEKIDLTML
NRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLL
GLTRASEIAGPPQMPNEFITYADTKIETRHPIRLYSRYIDRVHILFRFTHEEARDLIQRY
LTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMRNRLPRSITTLEWENS
FVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGVWNLQNEQTKERTAIAFLRV
DDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCE
NKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTH
FRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSW
DRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRT
DVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNR
RFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESVVMD
LCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVAESKDVF
DQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLH
SAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIF
SNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKR
LGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLP
FQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKM
LLKPDKTIITEPHHIWPTLTDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIIL
GAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDELIVTTTSPYEQAAFGSKTD
WRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICIADLRTQIAGYLYGLS
PQDNPQVKEIRCIVMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQD
VTSHARILENSKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYL
PTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMRYGTKLGTPRDYYHEDHRPT
HFLEFSNLEEGDTTEADREDTFT
NT seq 7092 nt   +upstreamnt  +downstreamnt
atgtggaatagcggagcgtcgtcctcgtcgtctcagatgccgccgccgccgccgccgccg
gtggcgccgcccgggacgacgggagggacaggcgtccccccgccgccggcagtacagccc
tcctatagcataccgccgtcccctgcggagctggaggcacagctagtggagaaggccagg
aagtggcaccagctcaactccaagaggtatggggacaagaggaagttcggctttgtcgag
gcccagaaggaggacatgccccccgagcacgtcaggaagatcatcagagaccatggagac
atgtcctccaagaaataccgtcatgacaaacgtgtctaccttggggctctgaaatttgtt
cctcatgcagtgtacaagcttcttgaaaacatgcctatgccctgggagcaggttcgcaat
gtgaaaattttgtatcacataactggtgcaatcacattcgtgaatgagatcccatgggtg
gttgaacccatatatttagcacagtggggtacaatgtggattatgatgcgaagagagaag
agagatcgacgacacttcaaaagaatgcgttttcctccttttgatgatgaggaacctcca
ttggattatgccgacaatttattagatgtggatccattggaggctattcaactggaatta
gatgaagaagaagattctgctgtatatacatggttctacgatcataaacctcttgtaaag
acaaagctcataaatggtccaagttatagaaagtggcatctttcacttccaatcatggca
actcttcatcggcttgcaggacagctgctctctgatttgattgatcgaaactatttttac
ttgtttgatatggagtcgtttttcactgccaaagcgctgaatatgtgcataccaggaggc
cccaagtttgagccactgtaccgtgatatggaaaaaggagatgaggattggaatgaattt
aatgacattaataaactcattattcgccagccgctcagaacagaatacagaatagcattt
cctcatctatacaacaataggccaaggaaagtgaagcttggcatatatcatactcctatg
ataatgtttattaaagctgaggatcctgatttacctgcattctactatgatcctctgatt
aaccccattacttccatcaacaaggttgaccgacgggagaagaaagtttatgaagaggat
gatgaggatgatttttctcttccagatggagttgaacctctactgcaaaacactcaacta
tatactgatactacggctgctggtatctcattgttgtttgcaccacgtccattcaacacg
agatctggtcgtactaggcgagctgaagatatacctcttgtatcagaatggtacaaggag
cactgccctccatcatacccagttaaagttcgtgttagttatcaaaagttattgaagtgt
tttgtattgaatgagttgcatcatcgacctccaaaggcacaaaaaaagaaacacttgttc
cgatcactccaagcaactaaattctttcaaacaacagaattggattgggcagaagcgggt
ttacaagtttgtaagcaaggatacaatatgttaaatctgttgattcacagaaagaatctt
aattatcttcaccttgattataatttcaatttgaaacctgtaaagacacttaccacaaag
gagcggaagaagtcacgatttggaaatgcgtttcatctatgtcgtgaaattttgcgactg
acaaagcttgttgttgatgccaacattcagttccgcctgggaaatgtcgacgcctttcaa
ttggctgatggcttgcagtatatattcgctcatgttggacagctgactggtatgtaccgt
tacaagtacagactgatgcggcagatcagaatgtgtaaagacttgaagcacctgatttac
taccgattcaatactggtcctgttgggaaaggtcccggctgtggattttgggcccctatg
tggagggtgtggttgtttttccttcgtggcattgtgcccttgctagaaagatggttgggt
aatttgcttgcacgccaatttgagggtcgccattctaaaggagttgccaagactgttaca
aagcaacgtgttgagagtcacttcgacttggaactccgagctgctgttatgcacgatgtt
cttgatgcaatgccagagggcattaagcagaacaaggctaggactatcttgcaacaccta
agtgaggcatggcgttgttggaaagccaacataccatggaaggttccaggacttccagta
cctattgaaaacatgattcttcgttatgtgaagtccaaggcagattggtggaccaatgtt
gctcactacaatcgggagcgtattagaaggggtgcaacggtcgataagactgtttgtaga
aagaacctaggaaggttgactcgcttgtggctaaaagctgagcaggaaaggcaacacaat
tacttgaaagatggtccatatgtcacccctgaagaagcggttgctatctacactacaaca
gttcattggctggagtcaaggaagttttctcctataccatttccacctttatcatacaaa
catgacactaaacttcttatcctggcactagaaaggctgaaagagtcttatagcgtggca
gtgagattaaatcaattgcaaagggaagaactgggtctgattgaacaagcctatgacaat
ccacatgaggcattgtcaaggataaagcggcacctgcttacacagcgtgcatttaaagag
gttggcattgagttcatggatttgtatagttacctgattcctgtgtatgaaattgaacct
ctggaaaaaattacggatgcatatcttgatcagtatttatggtacgaaggtgacaagcgg
caccttttccctaattgggtcaagcccgctgattctgagccacctcctcttcttgtctat
aaatggtgtcaaggtataaacaacttacagggcatatgggacacaagtgatggacagtgt
gttgtgatgctgcaaacaaagttcgagaagttcttcgagaaaattgacttgaccatgtta
aacaggcttcttcgtttggttcttgaccacaatattgccgattatgtcacagctaaaaac
aacgtagtgttgtcatacaaggatatgagtcacacaaactcatatggtctcattcggggt
cttcaatttgcttcatttgttgtgcaatattatgggcttgtgttagatctcttgcttctt
ggtttaactagagccagtgaaatagctggtcctcctcagatgcccaatgagttcattact
tacgcagacaccaaaattgagactaggcatcctattcggttatattcacgatacattgac
agagtacatattttgttccgcttcactcatgaagaggcacgagatctgattcagcgatat
cttacagagcatcctgatccaaacaatgaaaatatggttggatataataataagaaatgt
tggccaagggatgcaagaatgagattgatgaaacatgatgtcaaccttgggcgaagtgtt
ttttgggatatgaggaatcgattacctcgaagtatcacaacgttggagtgggaaaacagc
tttgtctctgtttacagcaaggataaccccaatctgctattcagcatgtgtggatttgag
gttcgcatattgccaaagataagaatgactcaagaggcatttagcaacacaaaagatgga
gtttggaacttgcagaatgagcagaccaaagagagaacagcaatagctttcttacgtgtt
gatgatgaacatatgaaggtgtttgagaatcgtgtgaggcagattcttatgtcatccgga
tcaacaacatttactaagatagtcaacaaatggaatactgctcttattggtcttatgaca
tattttcgtgaagcaactgtgcacacacaggagctattagatctgctggtcaagtgtgaa
aataagatccaaactcgtatcaagattggactgaattcaaagatgcctagcaggtttcct
cctgtcattttttacacaccgaaagaaataggaggccttggtatgttgtcaatgggtcac
attttgatcccacaaagtgatctaaggtacagccaacaaacggatgttggggttacacat
ttccgtagtggtatgagtcatgaggaggatcagcttattccaaacctttaccgctacata
cagccttgggagagcgaattcatcgattcacagcgtgtttgggctgaatatgctttaaag
aggcaggaagcgcaatcacaaaatagacgattaacccttgaggatcttgaggattcctgg
gatagggggatacctcggatcaacacccttttccaaaaagatcgtcatactctggcatat
gacaaagggtggagagtacgaactgattttaagcaatatcaagtcttgaagcaaaatcca
ttttggtggacccaccagcgacatgatggcaaactttggaacttgaataattatcggact
gatgtcatccaagcacttgggggagtcgagggtattctggaacacaccttatttaaaggg
acatattttccaacttgggaaggtctcttttgggagaaggcatcaggatttgaggagtct
atgaaatataagaagcttacaaatgcacaacggtctgggctgaatcaaatcccaaaccga
aggttcactttgtggtggtctcctaccataaatcgtgcaaatgtgtatgtaggcttccag
gtgcaacttgatctcacgggaatattcatgcatggaaagatacccacattgaagatatct
ttaattcagatatttcgtgctcatctttggcaaaaggttcatgagagtgttgttatggat
ctctgccaagttctggatcaggagttggatgcattagaaattgaaactgtacaaaaagag
accatacacccaaggaagagttacaagatgaacagttcttgtgctgatattcttcttttt
gctgcacatagatggccaatgtccaaaccaagcctagttgctgagtccaaagatgtgttt
gatcagaaagcaagcaataaatactggatagatgtgcaacttcgttggggagactatgat
tcacatgatatagaacgttacacaagggccaaatttatggattacacaactgacaacatg
tccatatatccatctcccactggtgtgatgattggacttgatttagcatataatctgcac
tccgcctttggcaattggttccctggttcaaagcctttgttggctcaagcaatgaacaaa
atcatgaagtcaaatccagcattatatgttttgagggagcgaataaggaagggtctacaa
ctgtattcatccgaacctactgaaccatatctttcatctcaaaactatggggagatcttc
agcaaccaaatcatatggtttgttgatgacacaaatgtatatcgagttacaatccataaa
actttcgagggaaatctcactacaaaacccatcaatggtgccatttttattttcaaccca
aggacagggcagctgtttctgaaggtgatccacaccagtgtgtgggcagggcaaaagcgt
cttggtcagttggcaaaatggaaaacggcagaggaagtggctgctcttgtgcggtcactg
ccagtcgaagagcagccaaagcaaattattgtgacccgcaaagggatgctggatcctttg
gaggtccatttgcttgatttccccaacatagtgatcaagggcagcgagctgcagttgccc
ttccaggcttgcttgaaaattgagaagtttggtgatttgattctgaaggccactgaacct
cagatggttcttttcaatatttatgatgattggttgaaaagtatttcatcatacaccgct
ttttctcgtcttatattgatcctacgggcactccatgtgaacaatgagaaggcaaagatg
ttactgaagcctgacaaaacaattatcactgaaccgcaccacatctggcccacacttaca
gatgatcagtggatgaaggtggaagttgcactgagagatctcatactttctgactacgcc
aagaagaacaatgtgaacacttctgcactaacacagtctgaaattcgtgatataattctt
ggtgctgagataactccaccctcacagcagagacaacagattgctgaaattgaaaaacag
gccaaagaagcgagtcaattgactgcagttacaacgaggacaacaaatgtgcatggagat
gaacttatagtcaccacaaccagtccctatgaacaagcagcatttggttctaaaactgac
tggcgtgttagggctatatcagcaacaaatctttatcttcgcgttaatcatatttatgta
aactcagatgacattaaggagactggatacacttacatcatgcctaaaaacatattaaag
aagttcatctgcatagcagatttacgaacacagattgcaggatatctatacgggttaagc
ccccaagataatccacaagtgaaagagatccgttgcatagtcatgccaccacaatggggg
actcatcagcaggttcatctcccatcagctcttcctgagcacgacttcttgaatgatcta
gagccgttgggatggatgcatactcagcccaacgagcttccccaactctctcctcaggat
gttacatctcatgctcgaattctagagaatagtaaacaatgggatggcgagaagtgcatc
attttgacgtgtagcttcactccaggatcttgctcgttgacagcgtataaactcacgcca
tcgggttatgaatggggccgtgtcaacaaggacactggaagcaatccacatggctacctg
ccaacacattatgaaaaggtgcagatgcttctcagcgaccgcttcttgggattctacatg
gttccagataatggcccttggaattacaacttcatgggggtaaagcacacagtgagtatg
cgatatggcacaaagcttggaacacctcgagactactaccatgaagaccataggccgaca
cattttctcgagttcagtaatttggaagagggggacactacagaggctgacagagaggat
acctttacgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (129)   
   KEGG ORTHOLOGY (1)   
   RefGene (125)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (144)   

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