KEGG   Phoenix dactylifera (date palm): 103715678
Entry
103715678         CDS       T03274                                 
Name
(RefSeq) serine/arginine repetitive matrix protein 1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03013  Nucleocytoplasmic transport
pda03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103715678
   03015 mRNA surveillance pathway
    103715678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pda03019]
    103715678
   03041 Spliceosome [BR:pda03041]
    103715678
Messenger RNA biogenesis [BR:pda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103715678
Spliceosome [BR:pda03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    103715678
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 103715678
NCBI-ProteinID: XP_038980018
UniProt: A0A8B9A804
Position
3:200340..213391
AA seq 875 aa
MSGGFFRGTSADQDARFSNKQAKLLKSQKFAPELDHVVDMTKVQMDVIRPWIATRVTELL
GFEDEVLINFVYGLLDGKEVDGKQMQIQLTGFMEKNTGKFMKELWGLLLSAQNNASGVPQ
QFLDAKKEETDKRKAETDRIAQEIQQRKEKEGRELEQEKQRRMDGAADKSRSSTAVLGSV
SKRSPRMAFSVHPEDDREVDTGHDSRSKSQEGRKSRSVSGSSQSQRYSISPKRRHRSPSK
RSISSERRYRSPPRRSISPRRRHSPRYARSPLRQRSPHTRRRSVSLSRHRSPSPVRRRSP
YARRRSPSYAWRRSPPLRRRSPVQVRRRSPSPSRYRSPIRRKSLSPARRRSPSPLRRRSP
PPRSPKHRRRSPLCSPRSRVRDYETSPRQRKRRRSPYRSRSPSYPSQSSSKEIDNRIEGI
DSKYYRDGYTSQRSREKKLPVHHTVDRAATERPVSGRKVSESRRLPISSRSPKRDSRNQN
DIHDREHGVTSEESPNQSESPSRLRRIAPRGIRSCSPSESPVKQTRRQMPRRDSPETNRE
REQPSYGREDAYHRSDSSCKKRRDSPANVQQKDSHAKDFSPQEYSSGRLADDYSPAAQGQ
ARNLEIRKKEHEENSEEDLPERHKRLVLQSPEQIEYGPGRIVDESYPPDNFYDRQRLAKK
HVRDASSEERVSNEHTVKSIYGDGYAVKAAKQSRSKSDEYRESRYETESDKKFKKKVDQS
NQFDTHDSDSEEIGAHRYQEMEKRRRKRSDKHKRDLDDSSESDFQIDDKKEAKRRRKDEK
RLRKEERRRRREERHRRKLERRAGKHKVKSVDTVTPPSDLEKIYNDADGSNDDGAIGKHP
HLGDIEETESEQKKLEIELREKALESLRAKKAISH
NT seq 2628 nt   +upstreamnt  +downstreamnt
atgtcgggtggattcttccggggaacctcggcggatcaggacgctcgcttctccaacaag
caagcgaagcttttgaagtcacaaaaattcgcaccggagctcgatcacgtggtggatatg
acgaaggtacagatggatgtgataaggccatggatcgcaacgagggtgactgagctcctt
ggattcgaagacgaagtcctcattaactttgtttatggtcttctggatggcaaggaggtg
gacgggaagcagatgcagatccagcttactgggtttatggagaaaaatactgggaagttc
atgaaggagctctggggtctactgcttagtgctcagaataatgccagcggggttcctcag
cagtttttggatgccaagaaagaggaaacagataaaagaaaggcggagactgatagaatt
gctcaggaaattcaacagagaaaagagaaagagggaagagagttagaacaagagaaacag
aggaggatggacggggcagctgacaagtcgaggtcttctactgcggttttgggttcagtt
tcaaagcgatcaccgcgaatggcttttagtgttcaccctgaggatgatagagaagtggac
actgggcacgattcaagatcaaaaagccaggaaggacgtaaatcaaggagcgtatctggt
tcgtctcagtctcaaaggtattcaatttctcctaagaggcggcatcgctcaccatccaaa
cggtctatatcttctgagaggcgatacagatctccacctcgacggtccatttctcctcgc
cgcaggcattcaccacggtacgctcgatcacctttaagacaaagatcacctcatactagg
cgaagatcagtttcactctccaggcaccgatctccctctcctgtccggcggagatctcct
tatgcacgaagaagatctccatcatatgcatggcgcagatctcctcccttgcgtcgtagg
tctccagttcaagtccgcaggagatcaccttctccctctcgttataggtcccctatccga
cgcaagtctttgtcaccagcaaggcgcagatccccatctcctttaaggagaagatcgccc
ccacctaggtctccaaagcaccgaagaaggtcacctctgtgttcaccaagaagtcgtgtc
agggattatgaaacatctccacggcaaagaaagaggaggcgcagtccatataggagccgg
agtccgtcatatccatctcagagttcgagcaaggagattgataaccgtattgagggcatt
gattccaaatattatcgtgatggatacacatctcagaggtctcgtgaaaaaaagttacct
gttcatcataccgtggatagggcagcgactgaacgccctgtctcaggacgcaaggtttca
gaatcacgccgacttccaatttcttcaaggtctcccaaacgtgattcaagaaatcaaaat
gacattcatgatagggagcatggtgtaacatctgaagaatctccaaatcagtcagagtca
ccatcccgtttgcgaagaatagccccaagaggaattagatcttgtagcccttcggagagt
cctgttaaacaaactagaagacagatgcctcgtcgtgacagtccagaaacaaatagagaa
agagaacaacccagttatggcagggaggatgcttatcataggtctgattcctcgtgcaag
aaaagaagagattcacctgctaatgtgcagcaaaaggattcccacgccaaggacttcagt
ccacaagagtattcttctggaagattggctgatgactactctccagctgcccaaggtcaa
gctcgtaacttggaaatcagaaagaaggaacatgaggaaaatagtgaagaagatcttcct
gaaaggcataaacggctagtattacaatcaccagaacaaatagaatatggtcctggaaga
atagtagatgaaagctatccaccagataacttctatgatagacagcgtttggctaagaaa
catgtgagagatgcatcttcagaggaaagggtatccaatgagcacacagtgaagagcatc
tatggtgatggttatgcagttaaagctgcaaaacaatcacgttcaaaaagtgatgagtat
agggaatcacgttatgaaacagaatctgataaaaagttcaagaaaaaggtggaccagagc
aaccagttcgatacccatgattctgattctgaagaaattggtgcccatagataccaggag
atggaaaagcgaaggcgcaaaaggtctgataagcataaaagagatttggacgacagttct
gagtctgattttcagatagatgacaagaaggaggccaagagaagaaggaaagatgagaaa
aggctacgcaaggaggagaggcgtcgcaggcgtgaagagaggcatcgcagaaagttagaa
cgtcgtgcaggcaagcataaagtgaagtctgtggatactgttactcccccttcagatttg
gagaaaatttataatgatgctgatggatcaaatgatgatggtgccataggaaagcatcct
catctaggtgacatagaagaaacagagtcggagcagaagaagcttgagatcgagctgcga
gaaaaggccctagaatctctcagagcaaagaaggctatcagtcattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (182)   
   KEGG ORTHOLOGY (1)   
   RefGene (178)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (1)   
   Pfam (1)   
All databases (196)   

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