KEGG   Phoenix dactylifera (date palm): 103716252
Entry
103716252         CDS       T03274                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103716252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pda03019]
    103716252
Enzymes [BR:pda01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     103716252
Messenger RNA biogenesis [BR:pda03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     103716252
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD HA2_N AAA_22 nSTAND3 T2SSE BEX NACHT Prefoldin_2 AAA_19 ATPase
Other DBs
NCBI-GeneID: 103716252
NCBI-ProteinID: XP_008802397
UniProt: A0A8B7CMM4
Position
2:2156069..2171355
AA seq 1037 aa
MSVGCGHRTLAYWTNPLRLRLPLGIALRHPCAMSYRPNYQGGRRGGGGRGGGGGGRGGGG
RGGGGGRGGGGRGGGGGRGEQRWWDPQWRAERLRQMAGEVEKLDENEWWNKIKQLKEGGQ
QELIVKRNFGRDGQNVLADMAQRQGLHFHAYNKGKTLVFSKVPLPDYRADLDERHGSTQK
EIKMSTETERRVENLLARSKETLTINDTASTSIQMARQSVPNMAVSKPELTEDDNAFKEK
FNIELRDLQHSRKATPSARAMQSFREKLPAFKVKDEFLKAIADNQVLVVSGETGCGKTTQ
LPQFILEEEIERLRGAECNIICTQPRRISAISVAARIASERGENLGETVGYQIRLEAKRS
AQTRLLFCTTGVLLRRLVQEPYLGGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRL
ILMSATINAELFSTYFGNAPIIHIPGLTYPVAEAFLEDVLEKTRYKIKSEFDNFQANSRR
RRRQPSTKNDPLTEMFEDVDIDAQYKNYSISTRQSLETWDGVQLDLGLVEATIEYICRHE
KDGAILVFLTGWDEISKLLDKIKGNSFLGNSSKFLVLPLHGSMPTVNQREIFDRPPSNMR
KIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGR
VQPGVCYRLYPKVIHDAMPQYQLPEILRTPLQELCLNIKSLQLGAVATFLAKALQPPDPL
SVKNALELLKTIGALDEMEELTPLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAAL
AHRDPFVLPMNRKEEADAAKRSFAGDSCSDHIALLKAFGAWKDAKCSGRERAFCWENFLS
PMTLQMMEDMRNQFLDLLSDIGFVNKARGVKTYNQYGDDLEMVCAVLCAGLYPNVIQCKR
RGKRTAFYSKEVGKVDIHPSSVNAGVHLFPLPYMVYSEKVKTTGIYIRDSTNISDYALLL
FGGSLMPSKTGEGIEMLGGYLHFSAPKSIVQLIQRLRGELDKLLQRKIEEPGLDIPAEGK
AVVAAAVELLHNQNVYH
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgtccgttggctgtggtcaccgcaccttggcttattggacaaaccctctgcgtctccgt
cttcccctggggatcgctcttcggcatccttgtgccatgtcgtaccgccccaactaccag
ggcggccgcagaggcggcggcggaagaggtggaggcggcggcggaagaggaggcggcgga
agaggtggcggcggcggcaggggcggcgggggaaggggtggcggcggaggccgcggggag
cagcggtggtgggatccccagtggagagccgagcgcctccggcagatggccggcgaggtg
gaaaagctggatgagaatgaatggtggaacaaaataaaacaattgaaggaaggcgggcag
caggagctgatagttaagcggaatttcgggcgtgatgggcagaatgttcttgcagatatg
gctcaaagacaaggcctgcacttccatgcatacaacaaaggaaagacacttgtgtttagc
aaagttcctttgccagattaccgggccgatcttgatgaacgacatggatcaacacagaaa
gagattaagatgtctacagagactgagagaagagtggaaaacctcttagctagatcaaaa
gaaacattgactattaatgataccgccagcacatccattcagatggccagacaatctgtg
cctaacatggctgtatctaaacctgaattaacagaagatgataatgccttcaaggagaag
ttcaatattgaacttagggacttgcaacactctcggaaggcaaccccaagtgcaagagca
atgcagtctttcagggagaaactaccagcattcaaagtgaaagatgaatttttaaaagct
atagcagataatcaggtacttgttgtatctggagagactggttgtggcaaaactacacag
ctacctcagttcatactggaggaggaaatagaacgtcttcgtggggcagagtgcaacata
atatgtactcaaccacgtcgaatatctgctatatctgttgcagcacgaattgcatctgaa
aggggtgagaatcttggagaaactgttggttaccagatccgattggaagcaaaacgttca
gctcaaacacgtcttctattttgcacaactggagtactgcttcggagactggttcaggag
ccatatttaggaggtgtcagtcatttactggtggatgaaattcatgaaaggggtatgaat
gaggatttccttattataattttgcgtgaccttctgcccaggcgtccggatcttcgtcta
atattaatgagcgccacaataaatgctgagctcttctctacatactttgggaatgcacca
atcatccatataccagggctgacttatcctgtagcagaagcgtttctggaagatgttctg
gagaaaacacggtacaagattaagtcagagtttgacaattttcaggcgaactcaagaaga
agaagaagacaaccatcaaccaaaaatgatccattgactgagatgtttgaggatgttgat
attgatgcccaatacaaaaactacagcatatctacaaggcaatctctcgaaacctgggat
ggtgtgcaactagatttgggtcttgtggaagcaacaatagaatatatttgccgccatgaa
aaagatggagcaatcctagtgttccttacgggttgggatgagatatctaagctgctcgac
aaaattaaggggaacagtttcctcgggaattctagcaagtttctagttcttccattgcat
ggttccatgccaactgtaaatcagcgcgaaatttttgacagaccaccaagtaatatgagg
aaaattgttctagcaacaaatatagcagaaagcagtattactatagatgatgttgtgtat
gttattgactgtgggaaggcaaaggaaacaagttatgatgctctgaataagttggcatgc
ttgttaccatcatggatatcaaaggcttcagcacatcagaggcgggggcgtgcagggcgt
gttcaacctggtgtttgctataggctgtacccaaaagttatacatgatgcaatgccacaa
tatcaattgcctgaaattcttcgaactccattgcaagaactatgccttaatattaaaagc
ctacagcttggagcagttgccacattcttagccaaggcacttcagccacctgatccactc
tccgttaaaaatgcactcgaacttctcaaaacaataggggcactagatgaaatggaggaa
ctcactcctctcggacgtcatctttgtacactgccattggatccaaatattggaaaaatg
ctgctcattggatctgtattccaatgtctagatccagcattgacaattgctgctgctctt
gcacatcgagacccatttgtcctaccaatgaacaggaaagaggaagcagatgctgcaaag
agatcctttgctggtgattcttgcagtgatcatatagctcttttaaaagcttttggagca
tggaaggatgcgaaatgtagtggaagggaacgtgctttctgttgggagaatttcttatcc
cccatgacattgcagatgatggaagacatgcgaaatcagtttcttgatttattatctgac
ataggttttgtaaacaaggctagaggagtcaagacatataaccaatatggcgatgatctg
gaaatggtatgtgctgtcctttgtgctgggctttatcccaatgtcatccagtgcaaaagg
agagggaagaggacagcattctacagtaaagaagttggaaaagtcgatatacatccatct
tctgtgaatgcaggggtccatttattccctttgccttacatggtttatagtgaaaaggtg
aagactacaggcatttatattagggactcgacaaatatatcggattatgctttacttctc
tttggaggaagcctcatgccgagcaagactggagagggcatcgagatgctaggaggctat
cttcatttctctgcaccaaaaagcatagtccaactaattcagaggttaagaggagaactc
gacaaacttctgcagaggaaaattgaggagccagggctcgatatccctgcagagggaaag
gctgttgttgctgcagctgttgagttattgcacaaccaaaatgtttaccactag

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