KEGG   Phoenix dactylifera (date palm): 103721399
Entry
103721399         CDS       T03274                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 21-like
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103721399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pda03041]
    103721399
Spliceosome [BR:pda03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    103721399
 Complex C
   U5 SnRNP specific factors
    103721399
SSDB
Motif
Pfam: DEAD Helicase_C ResIII DUF2986
Other DBs
NCBI-GeneID: 103721399
NCBI-ProteinID: XP_008809818
UniProt: A0A8B7CZX6
Position
8:6251002..6253648
AA seq 703 aa
MKRSADDRDRKLPAAAEVKPVFISKAERQRLALQRREEEVAEQRRRAQDLLHNQIHRPSS
SNYKPDPPSFASDTNHRDRDRDRDRDRDRDRDRDRRARDRDRDRDREEEARSRERARLEK
QAEREREKELEAIKEQYLGFKKPKKRVIRPSEKFRFSFDWENTEDTSLDMNTLYQNPHEA
RLLFGRGFLAGIDRREQKKLAARHEKETRDEIRRKEGVEERPEEAAAQREKEAAAELYDA
FDMRVDRHWTEKKLEEMTERDWRIFREDFNMSYKGSRIPRPMRSWAESKLSPELLKAVEK
AGYKTPSPIQMAAIPLGIQQRDVIGVAETGSGKTAAFILPMLTYITKLPPISEENEAEGP
YAVVMAPTRELAQQIEDETVKFAHYMGIKVASIVGGQSIEEQGFKLRQGCEVVIATPGRL
LDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI
YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQHVIMVKESEKMPRLRRL
LGDLGDKTTIVFCNTKKTVDAKAKDLDRLGYRVTTVHGGKSQEQREISLEGFRNRRFNVL
VATDVLGRGIDIPDVAHVINYDMPTHVEMYTHRIGRTGRAGKTGVATTFLTPEDFAVFYD
LKQILIQSNSPVPPELARHEASKFKPGTIPDRPPKRNETVFVH
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgaagcgctccgccgacgatcgggaccgcaagctccccgccgccgccgaggtgaagccc
gtcttcatctccaaggccgagcgccagcgcctcgcgctccagcgccgcgaggaggaggtc
gccgagcagcgccgccgcgcccaagacctcctacacaaccaaatccaccgcccctcctcc
tccaactacaagcccgaccccccctccttcgcctccgacaccaaccaccgcgaccgcgac
cgggaccgggaccgggaccgggaccgggaccgagaccgggaccgccgcgcccgcgaccgc
gaccgcgaccgagaccgggaggaggaggcccggagccgcgagcgcgcccgcctcgagaag
caggcggagagggagcgggagaaggagctggaggccatcaaggaacaatacttggggttc
aagaagcccaagaaaagggtcatcaggcccagtgagaagttccgcttctctttcgactgg
gagaacaccgaggacacctccctcgacatgaacaccctctaccagaaccctcacgaggcc
cgcctcctcttcggccgcggcttcctcgctggtattgaccgccgcgagcagaagaagctc
gccgcgcgccacgagaaggagacccgcgacgagatccgccgcaaggagggcgtcgaggag
cgccccgaggaggccgcggcccagcgcgagaaggaggctgctgcagagctctacgacgcc
ttcgacatgcgcgtcgaccgccactggaccgagaagaagctcgaggagatgacggagcgc
gactggcgtatattccgcgaggatttcaatatgtcctacaagggctctcgtatccctcgc
ccgatgcgcagctgggccgagagcaagctcagccctgagctcctgaaggctgtggagaag
gccggctacaaaacaccgtcccccatccagatggctgccatccctctcggtattcagcag
cgcgatgtgatcggggttgctgagaccgggtctgggaagacagcggcctttatcctcccc
atgctcacatatatcacgaagctgccgcccataagcgaggagaacgaggccgaggggccc
tatgcggtggtgatggcacctactcgcgagcttgcgcagcagattgaggatgagacggtg
aagtttgctcattatatggggatcaaggttgcctcgattgtcgggggtcagtcaattgag
gagcagggttttaagctgaggcaggggtgcgaggttgtgattgccactcctgggcgtctt
ctggattgtttggaacgacgatatgctgtcctcaaccagtgcaactatgttgttctcgac
gaagctgatcggatgattgacatgggttttgagccgcaagttgttggtgtcttggacgca
atgccttccagcaatctgaagcctgagaatgaggatgaggagcttgatgagaagagaatc
taccggacgacttacatgtttagtgcaaccatgcccccagctgtggagcgcctcgctagg
aagtacctgaggaaccctgttgtcgtgacaattggcacagcagggaaggccactgatctc
atcactcagcatgtgatcatggtgaaagagtcagagaagatgcccaggcttcgaaggctg
ctcggtgaccttggtgacaagacaaccattgtgttctgcaacaccaaaaagactgtggat
gcaaaggccaaagacttggacagactgggttatagggtgacgacagtccatggagggaag
tcacaggagcaacgagagatcagcctggagggattcaggaacaggcggttcaatgttctt
gtagcaacagatgtgctagggcgtgggattgatattcctgatgttgctcatgttatcaac
tatgacatgccaacacatgttgagatgtacactcatcgcattggaaggacagggcgtgct
ggaaagacaggagtggcgacgacgtttttgactcctgaagactttgcagttttctatgat
ctgaaacagatactgatccagagcaacagtccggtgccaccagagctggccagacatgag
gcatcgaagttcaagccaggaaccattccagatagacctccaaagcggaatgaaacagtt
tttgttcattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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